Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq866 170 4e-37 seq445 161 2e-34 seq611 147 5e-30 seq279 118 2e-21 >seq866 Length=73677 Score = 170 bits (188), Expect = 4e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| |||||||| |||||||||| ||| || | ||||| || | ||| Sbjct 71684 GTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTG 71625 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | |||||||||||| ||||||||||| || ||||| || || || Sbjct 71624 CTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 71565 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||||||||| || |||||| || || || | ||||| || || Sbjct 71564 CGTCTTGACGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTCTTGCCGGT 71505 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 71504 GAGGGTCTTGACGAAGATCTGCAT 71481 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| ||||| |||||||| |||||||||| || || | || || |||||||| Sbjct 71456 GTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGCTG 71397 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || ||||| || ||||||||||| || ||||| ||||| || Sbjct 71396 CTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 71337 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || || |||||||| || |||||| ||||| || | ||||| || || Sbjct 71336 CGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTGCCAGT 71277 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 71276 GAGCGTCTTGACGAAGATCTGCAT 71253 Score = 147 bits (162), Expect = 5e-30 Identities = 152/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| |||||||| || || || ||||| || | | |||| || || || Sbjct 67060 AACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTC 67119 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||||||||| || || ||||| ||||| ||||| || ||||| || Sbjct 67120 GAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG 67179 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||| || ||||||||||| || || || |||||||| | ||||| Sbjct 67180 GATCTTGGTCTTGACATTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTCTT 67239 Query 195111 TCCTGTCAAAGTTTTTACG 195129 || |||| ||| || ||| Sbjct 67240 GCCAGTCAGAGTCTTAACG 67258 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| |||||||| ||||| || | || || | || || || | ||| Sbjct 66154 GTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAACTG 66213 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | ||| |||||||| ||||||||||| || ||||| ||||| || Sbjct 66214 CTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 66273 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | |||||| || || |||||||| || ||||| || || || | ||||| || || Sbjct 66274 TGTCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATGGTCTTGCCGGT 66333 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 66334 GAGGGTCTTGACAAAGATTTGCAT 66357 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| ||||| || |||||||| | |||||| | || || || Sbjct 66833 ACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCA 66892 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || || ||||| || || || || || ||||| || Sbjct 66893 AGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 66952 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || ||||| || || ||||| || || | ||||| Sbjct 66953 ATCTTCGTCTTCACGTTGTCGATCGTGTCTGATGACTCAACTTCCAGCGTGATTGTCTTG 67012 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 67013 CCGGTGAGGGTCTTGACAAAAATCTGCAT 67041 >seq445 Length=91251 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || || |||||||| || ||||| |||| || |||| || |||||| Sbjct 7692 ACGAGGTGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCG 7633 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||||| Sbjct 7632 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 7573 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| ||||||||||| || || || || ||||| | ||||| Sbjct 7572 ATCTTGGTCTTGACGTTGTCAATGGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTG 7513 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | || || ||||| | ||||| Sbjct 7512 CCTGTGAGGGTCTTGACGAAGATCTGCAT 7484 >seq611 Length=85925 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | |||||| | || || ||| Sbjct 39107 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCG 39048 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| ||||| |||||||| || ||||| ||||| ||||| ||| Sbjct 39047 AGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGA 38988 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||||| || |||| ||| ||| ||||| || ||||| | ||||| Sbjct 38987 ATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 38928 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 38927 CCCGTCAGGGTCTTGACGAAGATCTGCAT 38899 >seq279 Length=20706 Score = 118 bits (130), Expect = 2e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || || || ||||| |||| ||||| | || || |||||||| Sbjct 11547 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTG 11606 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || |||||||| || || || ||||| ||||| || || || Sbjct 11607 CTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTT 11666 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||| || |||| ||| || || || || ||||| | |||||| || || Sbjct 11667 GGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGT 11726 Query 195117 CAAAGTTTTTACG 195129 | || || ||| Sbjct 11727 GAGGGTCTTGACG 11739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109467782793524