Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq130 367 2e-96 seq356 183 6e-41 >seq130 Length=41321 Score = 367 bits (406), Expect = 2e-96 Identities = 1110/1702 (65%), Gaps = 57/1702 (3%) Strand=Plus/Minus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 ||| ||||||||||| ||||| | |||| |||| ||||||||| |||||| | | | | Sbjct 38400 GTCGGCGGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGTCTTGTACAGTGC 38341 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTG---TATGGTCAG 212848 |||| | || || | |||||| | |||||| | || || | ||| |||| | | Sbjct 38340 CTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGCTATGATGCG 38281 Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAG 212907 | | ||| | ||||||||| || || || || || || | | | ||| || Sbjct 38280 GTTCTT---CATCTGCTCGTTCCACAGACCT-TGCTCGACAAGCTCACGCAGCAGCCAAG 38225 Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967 ||||||| | ||||| || || | |||||| | | ||||| ||| ||||| | Sbjct 38224 GGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAG 38165 Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 |||| | || ||||||| || |||||||| || || |||||||| || || | Sbjct 38164 GCTCAAAGCACTCGTTGAAGCCGAGAATCTGACTTGTCGAAGCGGTGGGCATAGGGGCGA 38105 Query 213028 CCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCC 213087 |||||| ||| | | ||||| || | ||| |||| | ||| |||||||||| Sbjct 38104 GCAGGAGGGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATCTCGGCCCAGTCCC 38045 Query 213088 ATCTGCCAGACAGGTCCTC-GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 | || |||| | | | || ||| | ||| | |||| ||| ||| Sbjct 38044 A-------GA---GTCCGCTGGGGGTGACTCCCCAGAGGTCGTATTGCAGCTCGCCCTTG 37995 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || |||||||||| ||| | ||||| || |||||||||| |||||||| || Sbjct 37994 CTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGAT 37935 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || || || |||| |||||| || || || |||| ||||||||||||||||||| Sbjct 37934 CGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC- 37876 Query 213267 GGGGACGTGAAGGGCATCATC-ATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 |||| || | ||| | | | ||| ||| | || || || || | ||| ||||| Sbjct 37875 GGGGCTGTCGAAGGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCCGAT 37816 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385 |||||||| | ||| | || ||| ||||| ||| | ||||| ||||| Sbjct 37815 ACCGATGGGGCGGTGGCGCATGTTGGACTTCTTTGCCTCGGGAACAGGGTAGTAGTTGAC 37756 Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG-- 213443 ||||||||||||||||||||||| | || ||||| || | | || | || | Sbjct 37755 GTCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAA 37696 Query 213444 --------TGATTGAACACGTAGCCCCCGTCC---TGCACAAACTCAGGCAGGGCGATGC 213492 | ||| ||| | | ||| || || | |||||| || || | Sbjct 37695 GTCGTATGTCCTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGCAGAGCCATAC 37637 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552 |||| |||||||| || || ||||| | | | |||||||||||||||| ||||||| Sbjct 37636 TGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACA 37577 Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCT 213612 ||||| ||| |||||| || ||||||| ||||| ||||| |||||||| |||| Sbjct 37576 GGTTGGAGCACTTGATGGTACCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCT 37517 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672 |||| |||||| | ||| || ||||| ||||| | | || | | ||| || | Sbjct 37516 TGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCGAGAACGGCGTACCAAAGCT 37457 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCT 213732 |||||||| || | || || | | |||||||| |||||||| Sbjct 37456 TTTGAGCCTTGACGGTTCGGCGAGCACGACC---CTCACGCTCGTACTTCTCGTAGAGAG 37400 Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792 | | |||||||| ||| |||| | || || || || ||||| ||||| || Sbjct 37399 CCTCGAATTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCG 37340 Query 213793 TCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852 ||| || |||| | | ||||| || |||||||| ||| |||| ||| || ||| || Sbjct 37339 ACCATTCTCCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGA 37280 Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912 | || || | || | ||| ||| || ||| || | || || || || || | Sbjct 37279 AGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGA 37220 Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGC 213969 ||| ||| | |||||| ||||| ||||||||||| ||||| || | || | ||||| | Sbjct 37219 AGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCAC 37160 Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029 ||||||| || | ||| ||||||||| ||| || | || || | ||||| | Sbjct 37159 CCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAG 37100 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCC 214089 | ||||| ||||| || || || ||||||| | | | | | ||| ||| | Sbjct 37099 AGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGC 37040 Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149 | |||||||| || |||| ||||||||||||| | | | ||| || |||||| Sbjct 37039 CGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCAT 36980 Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209 | || ||| || | | | | | || |||||| || | || || ||| | | Sbjct 36979 CGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTAC 36920 Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269 ||| |||||| || |||||| ||||||| | | |||| | || | ||| |||| | Sbjct 36919 CAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAG 36860 Query 214270 TCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCT--CATCAGCAT 214327 | || | | | | |||| | ||||| || || ||| || ||| ||||| Sbjct 36859 TGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGCCGACAGCAACTCGCATGAGCAT 36802 Query 214328 GTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG------AGCAGGTAGGAGCGCTC 214381 ||| ||||| | ||| | | |||| ||| ||| ||||| ||||||||||| Sbjct 36801 GTGTTGGGGGCGCTC--GGCGACCTT----GCCGTTGATGCGCAGCAGATAGGAGCGCTC 36748 Query 214382 CAGAGTCTTGAACCCAAAGTAG 214403 || |||||||| || |||||| Sbjct 36747 GAGGGTCTTGAAGCCGAAGTAG 36726 >seq356 Length=94465 Score = 183 bits (202), Expect = 6e-41 Identities = 370/540 (69%), Gaps = 28/540 (5%) Strand=Plus/Plus Query 47860 CTCA-AAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGG 47918 |||| |||||||||||||| || | || ||||||||||||||||||| |||||| || | Sbjct 84707 CTCACAAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTG 84766 Query 47919 GTGTGTTATACACCCGTG--TCAGG---CCCATCTGTTCCAGCAGGTGATCCGCGACGTA 47973 | ||| || ||| ||| | || | | ||||||| | || ||||| | Sbjct 84767 TGGCGTTGTA-----GTGCTTCACGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAA 84821 Query 47974 CTCGATGTATTTTGACATGAGG-GTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCT 48032 |||||||| | ||| || ||| ||||||||| || | || ||| | ||| | Sbjct 84822 TTCGATGTACTGGCTCATAAGTCGTGC-GTTCATGCCGATCAATGAACAGGGAAGAGCAT 84880 Query 48033 TTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACG----CGG 48088 || || || ||| ||| || || | || | | || || |||| ||| Sbjct 84881 CGGTCAGGAAAGCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGG 84940 Query 48089 GACTCTGAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGT 48146 | || || | || ||| ||||| || |||||| ||| |||||||| ||| Sbjct 84941 GG---TGCGGCCGCTTCTTG---AGGTGGCTGA---AGAGCAAGCAAGCAAAGTCGGTGT 84991 Query 48147 GCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCC 48206 ||| || ||||| |||||||||||| ||||||||||| |||||| ||||||| || | Sbjct 84992 GCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCAC 85051 Query 48207 TCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCG 48266 || ||||||||||| || | ||||||||||| ||||||||||||||||| || || | Sbjct 85052 GCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAG 85111 Query 48267 CGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCC 48326 | || || || | ||| | |||| | || || ||| ||||||| || |||| Sbjct 85112 CAAAGGCAACCAGGCGCTCGGCAAAAGTGGAGTCCTCGTCGTTGATCCAGCGCAGGGCCC 85171 Query 48327 AGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACT 48386 | || ||||| | ||||| | || || ||||| ||||| |||||| | || || || Sbjct 85172 ACTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATGGCGTCGAAGAGGTACTCGCGCT 85231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521481876480