Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq130 318 1e-81 seq356 179 7e-40 >seq130 Length=41321 Score = 318 bits (352), Expect = 1e-81 Identities = 752/1117 (67%), Gaps = 19/1117 (2%) Strand=Plus/Minus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC 221419 || || || ||||| | |||||||| ||| | | ||| | |||| || || Sbjct 37988 GGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGATCGCTCG 37929 Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || ||||||||||| ||||| |||||| ||||||| ||||||||||||| | Sbjct 37928 AGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGG-GCT 37870 Query 221480 GTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 || | ||| || | || ||| |||||| ||||||| || || | ||||||||||||| Sbjct 37869 GTCGAAGGCGTAACCCATGATCATGAAAG-CGTCGGCGAGACCGTTGACTCCGATACCGA 37811 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||| | ||| | | ||||||| || || || || || || |||||||||||| Sbjct 37810 TGGGGCGGTGGCGCATGTTGGACTTCTTTGCCTCGGGAACAGGGTAGTAGTTGACGTCGA 37751 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657 | | ||||||||||| | | ||| || |||||| ||||||| | | | Sbjct 37750 TGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAAGTCGT 37691 Query 221658 ACACCAACTCGCCGCCGTCGTG-GAGGGGTTCC--ACAAAAGCGTTTAGGGCAACGCTGG 221714 | | || | ||| ||| ||| | | || ||| || || | |||| Sbjct 37690 ATGTC--CTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGCAGAGCCATACTGG 37634 Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGT 221774 | ||||| || || || ||||| ||| | | |||| |||||||| || || |||| Sbjct 37633 CAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGT 37574 Query 221775 TGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGT 221834 || |||||||||||| || |||| || || || |||||||| |||||||||||||||| Sbjct 37573 TGGAGCACTTGATGGTACCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTGT 37514 Query 221835 AGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTC 221894 | ||||| || || |||||||||| ||| ||| | |||| || ||| || | | Sbjct 37513 AAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCGAGAACGGCGTACCAAAGCTTTT 37454 Query 221895 TGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGT 221954 || | || || | | |||||| || | | | | ||| ||||| | Sbjct 37453 GAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTC-GTAGAGAGC--CT 37397 Query 221955 CAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014 | || | || ||||| | || | || || || ||| |||||| |||||||| || Sbjct 37396 CGAATTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGACC 37337 Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074 | | ||| | || ||| | || |||||| | ||| |||||||| || || | |||| Sbjct 37336 ATTCTCCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGA 37277 Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134 | || | || || ||||||| ||||| ||| ||||| || || | ||||| || | Sbjct 37276 GCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGA 37217 Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194 ||||| |||||| ||||| | |||| ||| | || || || |||||||||||||||| Sbjct 37216 CGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCT 37157 Query 222195 GATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254 | || || | | |||||||| |||||| | || || | ||||| || Sbjct 37156 GGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGA 37097 Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT-TACTGGCAG-ACATGCC 222312 |||||| || || |||||| | ||| | || | | | | ||| | | ||| Sbjct 37096 CACCGTTAGTTCCGGCAATGTATGAGCCG--GTACCACGGATGCAGTGGATGTTGAGGCC 37039 Query 222313 GATACCACC-GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCT 222371 ||| ||||| | ||| || | ||||||||||||| ||||||||||||| |||||| | Sbjct 37038 GATGCCACCAGCCGTCTTGC-TGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCAT 36980 Query 222372 CCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAAC 222431 | || ||||| ||||| | | | | ||| || || || ||||| |||| |||| | || Sbjct 36979 CGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTAC 36920 Query 222432 AGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 ||||| || || ||||| ||| || || ||||| Sbjct 36919 CAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA 36883 >seq356 Length=94465 Score = 179 bits (198), Expect = 7e-40 Identities = 188/247 (76%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAAC 25854 ||||| ||| ||| ||| | ||||| ||||| ||||||| || ||||||||| Sbjct 85211 GCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCAAC 85152 Query 25855 AGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTT 25914 | || | | || |||| |||||| ||||| ||||||||||| || ||||||||||| Sbjct 85151 GACGAGGACTCCACTTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGCATCTTC 85092 Query 25915 TTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTG 25974 ||| ||| || || || ||||||||||||||||| || || ||||||||| || Sbjct 85091 TTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTC 85032 Query 25975 TACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||| |||||||||||||||||| | ||||||||||| |||| || ||||| ||| || Sbjct 85031 ACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCTTG 84972 Query 26035 CTCTACA 26041 |||| || Sbjct 84971 CTCTTCA 84965 Score = 86.0 bits (94), Expect = 1e-11 Identities = 159/233 (68%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| ||||| ||||| || || Sbjct 85608 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACTGCCGAGGAGATCGACCTC 85549 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAG---ACGAGCAGCATTTTCTCAAG 25593 ||||||||||| ||| |||| || | || | |||||| || || ||| Sbjct 85548 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCAGC 85489 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | ||||||||||| || || ||||| || || |||||||| || |||| | Sbjct 85488 CACGTCCTCGCATTCTTTGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCGG 85429 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | || || ||| | ||||| || |||||||| ||||| || Sbjct 85428 TTCAGCTCAGAGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAAT 85376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833514535680