Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq866 86.0 4e-11 seq445 86.0 4e-11 >seq866 Length=73677 Score = 86.0 bits (94), Expect = 4e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || |||||||| ||||| |||||||| || || | || || || | | ||| Sbjct 67049 CGGAGACGGAGAACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTT 67108 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | || || || |||||||| || || |||||||| || || || ||||| || || Sbjct 67109 CGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGGATGCCC 67168 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 |||||||| || ||||| |||||| ||||| || || | | | |||||| Sbjct 67169 TCCTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCGGAGGACTCAACCTCAAGG 67228 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACG 480761 || || || || || || |||||||||||| Sbjct 67229 GTGATGGTCTTGCCAGTCAGAGTCTTAACG 67258 >seq445 Length=91251 Score = 86.0 bits (94), Expect = 4e-11 Identities = 153/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || || || || || |||||| | || || || | ||| || Sbjct 7705 ACGGAGACGGAGGACGAGGTGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGATAGCGT 7646 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || | ||||| || ||||| || || || || ||||||||||| || || || || || Sbjct 7645 TCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCC 7586 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT---TC 480727 ||||||||||| ||||| ||||| ||||| || || | | || | || Sbjct 7585 CTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGGAG---GACTCTACCTC 7529 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || ||||| ||||| ||||| || || Sbjct 7528 GAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTG 7487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268137506203856