Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq130 161 1e-34 seq356 105 8e-18 >seq130 Length=41321 Score = 161 bits (178), Expect = 1e-34 Identities = 550/846 (65%), Gaps = 21/846 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| || || |||||||||||||| ||| || | Sbjct 36792 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 36851 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 36852 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 36910 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| ||||||||||| | || || ||||| |||||||| || ||| ||||| | Sbjct 36911 TCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCTTCCTGGTCACCATGAAGGACG 36970 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 |||| ||| | || ||||| | ||||| | | || || ||| ||| ||||| Sbjct 36971 ACTCGATCGATGGCATCTACGACACTCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 37030 Query 75450 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 | || || || | ||||||| || || ||| | | | | | ||| || Sbjct 37031 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCATAC----ATTGCCGGA 37086 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| || | ||||| | || ||||||||||| || ||| ||| || ||| Sbjct 37087 ACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCCCGC 37146 Query 75566 TATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 || || | || | || ||||| ||| | || |||| ||||| | || || Sbjct 37147 TACGTCGACCAGGGTGGCAACAAGCGTCC--AGGTG-CCTTCGCCATCTACATTGAGCCC 37203 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| | || || | |||||||| || | | ||||| || | || |||| Sbjct 37204 TGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTC 37263 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || ||||| | |||| ||||| || ||| | ||||||||||| || || Sbjct 37264 CGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAA 37323 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 | || ||||||| || | || || | | || || |||||| | || | Sbjct 37324 CAAAACGGAGAATGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGTCTCGCTGATGTCTAC 37383 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859 || || || || || || |||||| ||||| || |||||| | || || Sbjct 37384 GGCGACGAATTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGCTCGCCGAACC 37443 Query 75860 GTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 || | || | | | | ||||| | || ||||| | | |||||||||||||| | || Sbjct 37444 GT-CAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAGGCCCAGACGGAGACTGGCAACCC 37502 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 | |||||||||||||| ||| ||| ||| ||||||||||| | || || || Sbjct 37503 TTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACCAAAAGAACCTCGGTACCAT 37562 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 |||| |||| || || |||||||| || | ||||||| | | ||||||| ||||| Sbjct 37563 CAAGTGCTCCAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAGGTCGCTGT 37622 Query 76039 TTGCAA 76044 ||||| Sbjct 37623 CTGCAA 37628 >seq356 Length=94465 Score = 105 bits (116), Expect = 8e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 || ||||||||||| |||| ||||| || ||||| |||||||||||||| || ||| Sbjct 85136 TTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTC 85077 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | | || | ||| | |||||||| ||||||||||| || || |||||| || || Sbjct 85076 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 85017 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || |||||| |||||||| ||| || ||||| Sbjct 85016 CTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 84979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562351679360