Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq130 187 3e-41 seq356 168 8e-36 seq200 127 2e-23 seq149 116 5e-20 seq116 102 1e-15 >seq130 Length=41321 Score = 187 bits (206), Expect = 3e-41 Identities = 276/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| |||||||| ||||| ||||||| ||||| || Sbjct 37158 CTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 37099 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| || || || | ||| | ||||| | || | ||| | | ||| Sbjct 37098 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 37039 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| || |||| |||| ||| | ||||| ||||| |||||||||||||| || Sbjct 37038 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCATC 36979 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 |||||||||| |||||||| || || |||||||| || |||| |||| | || || Sbjct 36978 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 36919 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || |||||| ||| | ||||||| || ||| || Sbjct 36918 AGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 36859 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || | || |||| || || | ||| | | ||||| || || Sbjct 36858 GTCG------------ATGGCCTCGT---CGATGGAACTCCCGTGGATGCCGACAGCAAC 36814 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 ||||||||||||| ||||| |||||| |||| Sbjct 36813 TCGCATGAGCATGTGTTGGGGGCGCTCGGCGAC 36781 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| || || || ||| ||||||||||||||||||||| ||| Sbjct 37294 TCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 37235 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | |||| | ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 37234 GGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTG 37175 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 37174 GACGCTTGTTGCCACC 37159 >seq356 Length=94465 Score = 168 bits (186), Expect = 8e-36 Identities = 212/286 (74%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | |||||| |||| ||| ||||||||||| || ||||| Sbjct 84996 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 85055 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | |||| ||| ||||| ||||||||||| ||||| ||||| Sbjct 85056 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAGCAAA 85115 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | || ||||||||||| ||| || | |||| | ||||||||| || ||||| Sbjct 85116 GGCAACCAGGCGCTCGGCAAAAGTG--GA-GTCCTCGTCGTTGATCCAGCGCAGGGCCCA 85172 Query 869359 GTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417 |||||||||| | | | |||| || | || || |||||| ||||||| || | Sbjct 85173 CTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATGGCGTCGAAGAGGTACTCGCGCT 85231 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||||| | || |||||||| ||||| || || ||||| Sbjct 85232 GTGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTC 85277 Score = 118 bits (130), Expect = 1e-20 Identities = 165/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTCATGAACCGGCC 869712 ||| ||||||||||| ||| | ||||||| | |||||||| ||||||| | Sbjct 85375 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTC 85434 Query 869713 GGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGAT 869772 | | ||||||||| |||||||| || ||||| || || || |||||||| |||| Sbjct 85435 GACGAGGTTCTCGTTGACGATGCCATCTGACGCGGCAAAGAATGCGAGGACGTGGCTGAT 85494 Query 869773 AAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGTC 869829 ||||| ||||||| |||| | | | |||||| | |||| | |||||| Sbjct 85495 GAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAGAGGTC 85554 Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880 | ||||||||| ||||||| ||| ||||| ||||| |||||||| | ||| Sbjct 85555 GATCTCCTCGGCAGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCA 85605 Score = 98.7 bits (108), Expect = 1e-14 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 84712 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 84771 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| || ||||| | | ||||| ||||| |||||||| ||||||||| Sbjct 84772 TTGTAGTGCTTCACGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 84831 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||| ||| || | |||||||||||||| Sbjct 84832 TGGCTCATAAGTCGTGCGTTCATGCCGAT 84860 >seq200 Length=108880 Score = 127 bits (140), Expect = 2e-23 Identities = 272/403 (67%), Gaps = 10/403 (2%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 ||||| |||| |||||||| ||| | || |||||||||||| |||| || || || Sbjct 63974 GTCACAACCTACGGCGAGTCTCACTGCGCCTCTGTCGGCTGCATCGTCGATGGTGTTCCC 64033 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 ||| | ||| | || | || | |||| ||||| ||| | || || ||||| ||| Sbjct 64034 CCGGGTATGGCCCTCTCTGATGACGACGTCCAGGTCCAGCTCAGCCGTCGTCGACCCGGC 64093 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| ||||| || || ||| |||||||| || Sbjct 64094 CAGTCCAACCTGACCACCCCGCGCGACGAGAAAGACCGAGTCCAGATCCAGTCCGGTGTC 64153 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCC--AACCGCGACCAGC 18325 || || ||| |||||||||| | ||| | | | | | | || |||| || |||| Sbjct 64154 GAAAAGGGCATCACGCTCGGTACTCCCATAG--CGATGCGCGTCCAAAACCAGGATCAGC 64211 Query 18326 GGCCCGTCGACTATTCCGA---CATGTGCAAGGTG---CCGCGGCCCTCACACGCCGACT 18379 ||||| |||||| | || || | | | || ||||| ||||| ||||| || | Sbjct 64212 GGCCCAACGACTACACGGACCGCACGCTCGACTTGTACCCGCGTCCCTCTCACGCTGATT 64271 Query 18380 ACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCC 18439 |||||||| | | |||||||| ||||||| ||||| ||||| ||| || || | Sbjct 64272 ACACCTACCTCGAGAAGTACGGTGTCAAGGCTAGCTCGGGTGGAGGACGGAGCTCGGCTC 64331 Query 18440 GCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 | ||||| | || || || || ||||| || || ||||| Sbjct 64332 GGGAGACGATTGGTCGTGTAGCTGCAGGCGCCGTGGCGGAGAA 64374 Score = 100 bits (110), Expect = 3e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGC 19112 |||||||| ||||| || |||||| || ||| || || ||||| || || ||| Sbjct 64661 ATCGGCGGTACGGTCACCTGCGTGATCCGTGGCGTACCCATCGGTCTCGGTGAACCATGC 64720 Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172 || || ||| |||||||| |||||| ||||||||||| || ||||| || ||||||| Sbjct 64721 TTCGATAAGCTCGAGGCCAAGCTCGCACACGCCATGCTCTCCATCCCCGCTACCAAGGCC 64780 Query 19173 TTCGAGATTGGCAGCGGGTT 19192 |||||| ||||| ||| || Sbjct 64781 TTCGAGGTTGGCTCCGGCTT 64800 >seq149 Length=37758 Score = 116 bits (128), Expect = 5e-20 Identities = 188/264 (71%), Gaps = 10/264 (4%) Strand=Plus/Minus Query 508914 TCTTCAACATCACCCAGATGTGCGGCTGCGTGGGCCAGCAGAGCAATGAGGGCCAGCGCA 508973 || |||||||| ||||||||| || || || |||||||||| | |||||| |||| Sbjct 20631 TCATCAACATCTCCCAGATGTCCGCTTGTGTCGGCCAGCAGATCGTCGAGGGCAAGCGTG 20572 Query 508974 TCCACTCCGAGTCGGGCTCGCGCACCCTGGGCTGCTACCGGCACGCCGAGGCCGTGCCGC 509033 | | || || || | | || || ||||| || | | ||| || | | Sbjct 20571 TGCCCTTCGGGTTCCGATACCGGAC-----GCTGCCACATTT-CACAAAGGACGA-CTTC 20519 Query 509034 CG-CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAG 509092 | |||||||| |||||||||||| ||||||||| ||| || |||| | | ||| Sbjct 20518 AGTCCCGAGAGTCGCGGCTTTGTGGAGAACTCGTACTTGCGAGGTCTCACGGCACAGGAG 20459 Query 509093 ATGTTTCTGCACATGATCGGCGGG-CGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGC 509151 | || | ||| || |||||| |||||||| ||| |||||||||| ||||||||||| Sbjct 20458 TTCTTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGACGGC 20400 Query 509152 CGAGACGGGCTACATCCAGCGCCG 509175 ||||||||| ||||| ||||| || Sbjct 20399 CGAGACGGGTTACATTCAGCGACG 20376 >seq116 Length=43932 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || || ||||| ||||||||||| | || Sbjct 35063 GCTTGGAGAGTTCACCGGGGAGGATAAGTCGGACAGCGGTTTGGATCTCGCGGGCAGAGA 35004 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | |||||||| ||||||| |||| | Sbjct 35003 TGGTCGACTTCTTGTTGTAGGATGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGA 34944 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||| || ||||||| || | ||| | |||||| ||||| || |||||||| Sbjct 34943 TGTCTTGGACGAAGGAGTTCAGGATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGT 34884 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| || ||||||| Sbjct 34883 GCACCTGCTTGAGGACACGGTAGATG 34858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107059433128124