Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq11 98.7 8e-16 seq866 93.3 3e-14 >seq11 Length=65884 Score = 98.7 bits (108), Expect = 8e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 34495 GGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554 || || | |||||| || || |||| |||||| ||||||| |||||||||||||| Sbjct 21653 GGGCGACTAAGCGCGCGAGCAATGTCGGTCATGTTTGCGATGACGGTCTTGATGCCGTTT 21712 Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614 ||||| ||||| | ||||| || | | ||||| ||||||||||||||| |||| Sbjct 21713 CCCTTGCCTTCAATCTTGGTCTGGAGGAGGGGCATCTTGTAGCGGTAGAACTTGTCCTGG 21772 Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCAT 34643 |||| | |||||| |||||| |||| Sbjct 21773 ACATCTCTACGAACGTTAACAGTCGCCAT 21801 >seq866 Length=73677 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| || | |||||||| ||||| || |||| |||| | Sbjct 66357 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAGTCATCA 66298 Query 110333 GATACTGTCGGCCAGGTAAA-ACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | | || || ||| |||||| ||||| || ||| | || ||| || Sbjct 66297 GACACCATCGACAATGTCAAGACA-AAGATTCAGGACAAGGAGGGCATTCCTCCGGACCA 66239 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| || | || | || || || ||| ||||||| | | | || || |||| ||||| Sbjct 66238 ACAGCGATTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAA 66179 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||||||| || || || ||||| |||| Sbjct 66178 CATTCAAAAGGAGTCCACACTGCACTTGGT 66149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412836709375196