Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq356 192 9e-43 seq116 152 8e-31 seq130 141 1e-27 seq2 123 4e-22 seq149 116 6e-20 seq970 100 5e-15 >seq356 Length=94465 Score = 192 bits (212), Expect = 9e-43 Identities = 223/300 (74%), Gaps = 3/300 (1%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | |||||| ||| ||| ||||||||||| || ||||| Sbjct 84996 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 85055 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| |||| ||| ||||| ||||||||||| ||||| ||||| Sbjct 85056 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAGCAAA 85115 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || ||||||||||||||| | |||| | ||||||||| || ||||| Sbjct 85116 GGCAACCAGGCGCTCGGCAAAAGTG---GAGTCCTCGTCGTTGATCCAGCGCAGGGCCCA 85172 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 ||| ||||||| | | || ||| | || || |||||| ||||||| || || Sbjct 85173 CTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATGGCGTCGAAGAGGTACTCGCGCTG 85232 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | ||||| | ||| |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 85233 TGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTC 85292 Score = 111 bits (122), Expect = 2e-18 Identities = 151/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | | | |||||||| |||| || || | |||||||| |||||||| Sbjct 85400 GCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTCGACGAGGTTCTCGTTGACGATGCCA 85459 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || ||||| || || ||||||||||| |||| ||||| ||||||| |||| | | | Sbjct 85460 TCTGACGCGGCAAAGAATGCGAGGACGTGGCTGATGAAGTGTCGCTCGTTGTCGTTCAAC 85519 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | |||| | |||||||| ||||||||| ||||| || || Sbjct 85520 TTGTTGTCCCAGTCGTGCATGTCCTTGGAGAGGTCGATCTCCTCGGCAGTCCAGAACGAT 85579 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| ||||| |||||||| | ||| ||| Sbjct 85580 GCCTCTGCCTTCTTGTACATTTGCCAGATC 85609 Score = 89.7 bits (98), Expect = 8e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 84712 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 84771 Query 793989 AGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTAC 794048 |||||||||| || |||||| | | ||||| ||||| ||||| ||||| |||||| Sbjct 84772 TTGTAGTGCTTCACGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 84831 Query 794049 TGGCACATGAGGGCGGCGTTCATGCCGAT 794077 |||| ||| || |||||||||||||| Sbjct 84832 TGGCTCATAAGTCGTGCGTTCATGCCGAT 84860 >seq116 Length=43932 Score = 152 bits (168), Expect = 8e-31 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||||| |||||||||||| |||| ||||||| ||| ||||| ||| | | Sbjct 35101 GTACTTGGTGACGGACTTGGTACCCTCAGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 35042 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || || ||||| ||||||||||||| ||| || |||||| | Sbjct 35041 GATAAGTCGGACAGCGGTTTGGATCTCGCGGGCAGAGATGGTCGACTTCTTGTTGTAGGA 34982 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | |||||||| ||||||| |||| ||||| | ||| || ||||||| Sbjct 34981 TGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGATGTCTTGGACGAAGGAGTTCAG 34922 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||| ||||| || ||||||||||||||||||||| || Sbjct 34921 GATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGAC 34868 >seq130 Length=41321 Score = 141 bits (156), Expect = 1e-27 Identities = 186/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| || |||| ||| |||||||| ||||| ||||| | ||||| || Sbjct 37158 CTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 37099 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | ||||| || || || | ||| | ||| | | || | ||| | | ||| Sbjct 37098 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 37039 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || |||| |||| ||| | ||||| | || || || ||||||||||| || Sbjct 37038 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCATC 36979 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 |||||||||| |||||||| | ||| |||||||| || |||| ||| | || || Sbjct 36978 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 36919 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 || |||||||| ||||| Sbjct 36918 AGCGTTGAAGAGGGTGGG 36901 Score = 100 bits (110), Expect = 5e-15 Identities = 280/434 (65%), Gaps = 4/434 (1%) Strand=Plus/Minus Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAG 2071640 || ||| ||||||||||||| || | |||| || ||||||| ||||| | | Sbjct 37590 GATCTCCGTGCACAGGTTGGAGCACTTGATGGTACCGAGGTTCTTTTGGTTCGACTTGCG 37531 Query 2071641 GTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGAT 2071700 |||| | |||||||||| |||||| | || || ||||| |||| ||| || | Sbjct 37530 GTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCGAGAAC 37471 Query 2071701 GGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNN 2071758 ||| |||||| ||| | || | | || | || || |||| Sbjct 37470 GGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGG--CGAGCACGACCCTCACGCTCGTAC 37413 Query 2071759 NNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGAC 2071818 |||| || || || || |||||| | || || ||||| ||||| Sbjct 37412 TTCTCGTAGAGAGCCTCGAATTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCG 37353 Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878 ||||| | |||||||| || ||| | || || ||| |||| ||| || Sbjct 37352 GGGCACATCAGCGACCATTCTCCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGATC 37293 Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938 || ||| |||| ||||| || || || ||| ||||||||||||||||||||| | ||| Sbjct 37292 CAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGG 37233 Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTG 2071998 ||||| | |||| || ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 37232 TCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGA 37173 Query 2071999 CGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 37172 CGCTTGTTGCCACC 37159 >seq2 Length=141261 Score = 123 bits (136), Expect = 4e-22 Identities = 170/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 53719 GTACTTGGTGACCGACTTGGTCCCCTCCGAGATGGCGTGCTTGGAGAGTTCACCGGGAAG 53778 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || ||||| || ||||||||||| | | ||| ||| | |||||| || | Sbjct 53779 GATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGATGGTGCTCTTCTTGTT-GTATG 53837 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || || | || |||| ||||||| |||| ||||| | || || ||||| | Sbjct 53838 ATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGATGTCTTGTACGAAGGAGTTGA 53897 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||| ||||| || ||||||||| || |||||||| || Sbjct 53898 GGATGGCCATGGCCTTGTTTGAGATACCAGTGTCGGGGTGGACTTGCTTGAGGAC 53952 >seq149 Length=37758 Score = 116 bits (128), Expect = 6e-20 Identities = 112/141 (79%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||||| |||||||||||| ||||||||| ||| || |||| | | ||| | Sbjct 20515 CCCGAGAGTCGCGGCTTTGTGGAGAACTCGTACTTGCGAGGTCTCACGGCACAGGAGTTC 20456 Query 431082 TTTCTGCACATGATCGGCGGG-CGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140 || | ||| || |||||| |||||||||||| |||||||||| |||||||||||||| Sbjct 20455 TTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGACGGCCGA 20397 Query 431141 GACGGGCTACATCCAGCGTCG 431161 |||||| ||||| ||||| || Sbjct 20396 GACGGGTTACATTCAGCGACG 20376 >seq970 Length=70762 Score = 100 bits (110), Expect = 5e-15 Identities = 200/289 (69%), Gaps = 13/289 (4%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 |||||||||||| | || ||| || |||||||||| | ||| | || || || ||| Sbjct 17588 TCAATCTTGGAGTCCGCATCGGAGGAGCTCATCTTGGAGCCCT---TAAGACCGGGTACC 17532 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | ||| | || ||| |||||| |||||| ||| |||||| || ||| Sbjct 17531 ATGGCGTTCATGAGATGGGCGCGCTTTGCGTAGCCGAGCTTGGGCAGGACCTCCTCGGCA 17472 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | | | ||||| || ||||||||| || || || ||| ||||||| |||||| |||| Sbjct 17471 AGGACGAAGATTTTTCGCTGGTCGACACCTCCGAATTGGAAGTCGACGCCGAGGTACTGC 17412 Query 2411566 TCGTCGAGGGCCTGCATGAGC-GGGTAGACGAGGTTGCTGAGCG--GCGGGTTGCGGTCC 2411622 || ||||| || || | || | ||||||| ||| ||||| | |||| | | || Sbjct 17411 TCATCGAGCGCTTGGA-GACCGGGGTAGATGAG--ACCTGAGAGGAGCGGACTCGAGACC 17355 Query 2411623 ATCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCAC 2411669 |||||| |||| ||| | |||| || ||| ||||| ||||||| Sbjct 17354 TGCTTGACGACCTCAGCGCCAGCCTTCTTGGCGTCGTGC--TCGGTCAC 17308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916143003926708