Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq866 129 5e-25 >seq866 Length=73677 Score = 129 bits (142), Expect = 5e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 29553 TCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATA 29612 || ||| || || | || || || ||||| ||||| ||||| || ||||||||||| || Sbjct 71714 TCATTGGCCACCACGCAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTA 71655 Query 29613 ATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATC 29672 ||| | || |||||| ||| || | || ||||| || | ||||||| ||| || || Sbjct 71654 ATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTC 71595 Query 29673 CGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAA 29731 ||| ||||| ||||| ||||| || || || || ||||| | || | ||||| || Sbjct 71594 CGGAGGAATGCCCTCCTTGTCCTG-GATCTTCGTCTTGACGTTATCAATGGTGTCGGATG 71536 Query 29732 GTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || || ||||| ||||| || | ||| || || || |||||||| Sbjct 71535 ATTCCACCTCGAGTGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 71481 Score = 116 bits (128), Expect = 3e-21 Identities = 169/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 ||| ||| || || | | ||| || ||||| || || ||||| || ||||||||||| | Sbjct 66123 ATCATTGGCCACCGCGGAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGT 66182 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 | |||| | |||||| || || | || ||||| || | ||||||| || || | Sbjct 66183 AGTCCGACAGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGGT 66242 Query 29672 CCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAA 29730 |||| ||||| ||||| ||||| || ||| ||||| |||||| | || | ||||| || Sbjct 66243 CCGGAGGAATGCCCTCCTTGTCCTG-AATCTTTGTCTTGACATTGTCGATGGTGTCTGAT 66301 Query 29731 AGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || ||||| || | ||| || ||||| || ||||| Sbjct 66302 GACTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 66357 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| ||||| || || || ||||||||||| ||||| | | |||||| Sbjct 71467 CGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCG 71408 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || || || || | || | | || |||||||| ||||| ||||| ||| Sbjct 71407 TCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTG 71348 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || || |||||| | || | ||||| || ||| || |||||||| || Sbjct 71347 TCCTG-AATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGAT 71289 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || || || |||||||| Sbjct 71288 GGTCTTGCCAGTGAGCGTCTTGACGAAGATCTGCAT 71253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385214636597052