Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq445 127 4e-24 seq866 111 3e-19 >seq445 Length=91251 Score = 127 bits (140), Expect = 4e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || |||||||| || || || || || ||||| ||| || Sbjct 7699 ACGGAGGACGAGGTGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCC 7640 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || || || || || ||||| || | |||||| ||||| || || || ||||| Sbjct 7639 GTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTT 7580 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| ||||| | || || || ||||| || || | ||||| || | || || Sbjct 7579 GTCTTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGGAGGACTCTACCTCGAGGGTGAT 7520 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATA 82817 ||||||||||| | ||||| || || |||||||| || ||| Sbjct 7519 GGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCATGATGATA 7477 >seq866 Length=73677 Score = 111 bits (122), Expect = 3e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || ||||||||||| || || ||||| || || ||||| | Sbjct 66357 TACCACCACGCAGGCGGAGGACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGG 66416 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || || || | || || || || ||||| || | ||||| || |||| Sbjct 66417 AAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAG 66476 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| | ||||| || || ||||| || | ||| | Sbjct 66477 GGATGCCCTCCTTGTCCTGGATCTTGGTCTTTACGTTGTCGATCGTGTCTGATGATTCAA 66536 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || |||||||| || | ||||| || || |||||||| Sbjct 66537 CTTCGAGTGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 66585 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || ||||| |||||||| || || || || || || || | Sbjct 71253 TACCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGG 71194 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||||| || || || ||||| || ||||| || | ||||| || || | Sbjct 71193 AGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGGG 71134 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||| | || ||||| || || || || | || | Sbjct 71133 GAATGCCCTCCTTATCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAA 71074 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 | || | || || |||||||| |||| ||||| || Sbjct 71073 CCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 71037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814972569508