Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq866 132 3e-26 >seq866 Length=73677 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || || | ||||| || ||||| ||| ||||| |||||||||||||| Sbjct 71480 ACCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGA 71421 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || |||||||| || || | |||||| ||||| | || Sbjct 71420 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGG 71361 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| ||| || | |||| ||| | |||||| |||||||| Sbjct 71360 AATGCCCTCCTTGTCCTGAATCTTC-GTCTTGACATTGTCGATGGTGTCTGATGATTCCA 71302 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || | ||| || || |||||||||||| Sbjct 71301 CCTCAAGAGTGATGGTCTTGCCAGTGAGCGTCTTGACGAAGATCTGCATA 71252 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || || | ||||| || |||||| ||| ||||| |||||||||||||| Sbjct 71707 CCACCACGCAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAA 71648 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || ||||| || || ||||| || ||||| || || || || | || Sbjct 71647 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 71588 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || ||| || | || | || | ||||||| ||||||||| Sbjct 71587 ATGCCCTCCTTGTCCTGGATCTTC-GTCTTGACGTTATCAATGGTGTCGGATGATTCCAC 71529 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || || |||||||||||| Sbjct 71528 CTCGAGTGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 71480 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || || | ||||| || | ||| ||| || || |||||||||||||| Sbjct 66586 ACCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATCGGA 66645 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | ||| |||||||| || || | |||||||| || | || Sbjct 66646 AAGGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 66705 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| || || | || | ||| | |||||| ||| |||| Sbjct 66706 GATACCCTCCTTGTCCTGAATCTT-GGTCTTTACGTTGTCGATGGTGTCTGATGACTCCA 66764 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 66765 CCTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 66814 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || || | ||||| || ||||| ||| || || |||||||||||||| Sbjct 66358 ACCACCACGCAGGCGGAGGACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGGA 66417 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || ||||| || || ||||| || || | |||||| || || | || Sbjct 66418 AAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGG 66477 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | || | ||| | ||||| |||||| | Sbjct 66478 GATGCCCTCCTTGTCCTGGATCTT-GGTCTTTACGTTGTCGATCGTGTCTGATGATTCAA 66536 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 66537 CTTCGAGTGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 66586 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| ||||| ||||||||||| || || ||||| |||| || | || Sbjct 66839 TGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGC 66898 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||| || | || | ||| || ||||| || ||| Sbjct 66899 TTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 66958 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | || | ||| | ||||| ||| || || || | |||||| || || || || Sbjct 66959 -GTCTTCACGTTGTCGATCGTGTCTGATGACTCAACTTCCAGCGTGATTGTCTTGCCGGT 67017 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || ||||| ||||||||| Sbjct 67018 GAGGGTCTTGACAAAAATCTGCATA 67042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328700106090240