Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq866 105 2e-17 seq611 93.3 1e-13 seq279 86.0 1e-11 >seq866 Length=73677 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| ||| || ||| Sbjct 66582 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACACTCGAAGTTGAATCATCAGAC 66523 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || || || || || |||||| || Sbjct 66522 ACGATCGACAACGTAAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAACAG 66463 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| ||||||||||| ||||| | || | ||||||||||| || Sbjct 66462 CGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 66403 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| ||||| ||| Sbjct 66402 CAGAAGGAGTCAACTCTGCAC 66382 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| |||||||| || || || |||||| | || |||||| || ||| Sbjct 71256 CAGATCTTCGTCAAGACGCTCACTGGCAAGACCATCACTCTTGAGGTGGAATCATCAGAC 71315 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || ||| ||||| || Sbjct 71316 ACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCTCCGGATCAACAG 71375 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| | || || || | || | ||||||||||| | Sbjct 71376 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGATTACAACATT 71435 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || ||||||||||||||| Sbjct 71436 CAAAAGGAGTCTACTCTTCAC 71456 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | || |||||| || ||| Sbjct 71484 CAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACACTCGAGGTGGAATCATCCGAC 71543 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || ||| |||||| ||| Sbjct 71544 ACCATTGATAACGTCAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAA 71603 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| ||||||||||| ||||| | || | ||||||||||| | Sbjct 71604 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATT 71663 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||||||| Sbjct 71664 CAAAAGGAGTCCACTCTTCAC 71684 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| || || || ||||| ||||||| || || ||| Sbjct 67038 CAGATTTTTGTCAAGACCCTCACCGGCAAGACAATCACGCTGGAAGTTGAGTCATCAGAC 66979 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || |||||| || Sbjct 66978 ACGATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 66919 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| |||||| | || || || | ||| | | ||||||||| || Sbjct 66918 CGCCTTATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAACATC 66859 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || ||||| || || |||||||| Sbjct 66858 CAAAAGGAGTCCACCCTCCACCTTGT 66833 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || ||||| || || || ||||| | || ||||| || ||| Sbjct 66354 CAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAGTCATCAGAC 66295 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || || || || ||| |||||| || Sbjct 66294 ACCATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 66235 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| ||||||||||| || || | || || | || |||||| | Sbjct 66234 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAACATT 66175 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || ||||| || || ||| Sbjct 66174 CAAAAGGAGTCCACACTGCAC 66154 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || || || |||||| || | |||||||||||||||||| Sbjct 67185 AAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTTATCTTCGCCGGAAAG 67126 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || || || | || ||| | || |||||| ||||||| ||||| || |||||| Sbjct 67125 CAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGGAGTCCACACTTCAC 67066 Query 206374 CTTGTT 206379 |||||| Sbjct 67065 CTTGTT 67060 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 |||||||||||| || ||||| ||||||| || ||||| | ||| || | || || || Sbjct 67060 AACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTC 67119 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||||||||||||||| || || || Sbjct 67120 GAGCTGCTTTCCGGCGAAGATAAGACGCTGCTG 67152 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | || ||||| || ||| Sbjct 66810 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAGGTGGAGTCATCAGAC 66751 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| |||||||| || || || || || |||||| || Sbjct 66750 ACCATCGACAACGTAAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 66691 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||||||||| | || || || | || | ||||||||||| || Sbjct 66690 CGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATC 66631 Query 206353 CAGAAAGAGTCTAC 206366 ||||| ||||| || Sbjct 66630 CAGAAGGAGTCCAC 66617 >seq611 Length=85925 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | || ||||| ||| ||| Sbjct 38902 CAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 38961 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| | || ||| || ||||| || || ||||| ||| |||||| || Sbjct 38962 TCCATCGACGCCGTCAAGACCAAAATTCAGGACAAGGAAGGTATTCCCCCGGACCAACAG 39021 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| ||||||||||| |||||| | || || || | ||| | | || |||||| || Sbjct 39022 CGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAACATC 39081 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || ||||| || Sbjct 39082 CAGAAGGAGTCGACCCTCCACCTCGT 39107 >seq279 Length=20706 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || |||||||| | || || || || ||| | |||| | Sbjct 11736 CAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGACGC 11677 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || ||||| || |||||| || | || ||||| Sbjct 11676 CGTCAAGACCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAACAGCGTCTCATCTT 11617 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || || || | ||| | |||| |||||| ||||||| ||||| Sbjct 11616 CGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAGTC 11557 Query 206364 TACTCTTCAC 206373 ||||| ||| Sbjct 11556 CACTCTCCAC 11547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181806081899212