Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq866 125 7e-24 seq611 123 3e-23 seq445 113 5e-20 seq279 109 6e-19 seq130 89.7 5e-13 >seq866 Length=73677 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || ||||| |||||||||||||||||||| Sbjct 66131 CCACCGCGGAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGAC 66190 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || | ||| ||||| || || ||||| ||||| || || || || Sbjct 66191 AGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGA 66250 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| ||| ||||| ||| | ||||| || || ||||| Sbjct 66251 ATGCCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATGGTGTCTGATGACTCCACC 66310 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | || || || || |||||||| Sbjct 66311 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 66357 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||||||||||||||| ||| | |||| | ||| |||||||| Sbjct 71456 GTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGCTG 71397 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || || | |||||| ||||| || || ||||| || || || ||||| || Sbjct 71396 CTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 71337 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | ||||| || |||||||| || ||||| ||||| || || || Sbjct 71336 CGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTGCCAGT 71277 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 71276 GAGCGTCTTGACGAAGATCTGCAT 71253 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||||||||||||||| ||| || |||| | || || | ||| Sbjct 71684 GTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTG 71625 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || ||||| || || || || || || ||||| || || || || || || Sbjct 71624 CTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 71565 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| || | |||||||| |||||||| ||||| || || || || ||||| Sbjct 71564 CGTCTTGACGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTCTTGCCGGT 71505 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 71504 GAGGGTCTTGACGAAGATCTGCAT 71481 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545 || || | ||| || | || ||||| || ||||| ||||| || |||||||||| || | Sbjct 67043 CCACCGCGGAGACGGAGAACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAC 67102 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || || | ||| |||||||| || || || || || | ||||||||| || || || Sbjct 67103 AA-TGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGG 67161 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || || || || ||||| ||| | |||||||| || || || Sbjct 67162 GATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCGGAGGACTCAAC 67221 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || || || ||||| || || || | ||| |||||| Sbjct 67222 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 67258 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||||||||||||||||||| | |||| | ||| || ||||| Sbjct 71228 GTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTG 71169 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || || | ||||| || || || || ||||| || || ||||| || || Sbjct 71168 CTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCTTGGATCTT 71109 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | ||||| || || || || ||||| || ||||| || || || Sbjct 71108 GGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 71049 Query 134690 TAAAGTTTTAACG 134702 | ||| || ||| Sbjct 71048 CAGAGTCTTGACG 71036 >seq611 Length=85925 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || || || ||||| || ||||||||||| || || | Sbjct 39116 AGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGG 39057 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | ||||| || || || || || ||||| Sbjct 39056 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGAATACCTTCC 38997 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || |||||||| ||||| ||||| | | |||||| || ||||| ||||| || Sbjct 38996 TTGTCCTGAATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTG 38937 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || | || || ||||| || ||||| Sbjct 38936 ATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 38899 >seq445 Length=91251 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || ||||| ||||| |||||||||||| Sbjct 7710 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGAT 7651 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| || || || | ||| || || || || || Sbjct 7650 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 7591 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || ||||| ||| | |||||||| || || || Sbjct 7590 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGGAGGACTCTACC 7531 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | || || ||||| || ||||| Sbjct 7530 TCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 7484 >seq279 Length=20706 Score = 109 bits (120), Expect = 6e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| || |||||||||||| | ||| || ||| |||||||| Sbjct 11547 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTG 11606 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || || | |||||| || || || || || ||||| || || || || || Sbjct 11607 CTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTT 11666 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||||| | | ||||||||| || || ||||| || || || || ||||| Sbjct 11667 GGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGT 11726 Query 134690 TAAAGTTTTAACG 134702 | || || ||| Sbjct 11727 GAGGGTCTTGACG 11739 >seq130 Length=41321 Score = 89.7 bits (98), Expect = 5e-13 Identities = 275/423 (65%), Gaps = 2/423 (0%) Strand=Plus/Plus Query 8542 TCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCC 8601 || |||||||||||| | ||| | || | || || | ||||| |||||||| || Sbjct 37789 TCCAACATGCGCCACCGCCCCATCGGTATCGGAGTCAACGGTCTCGCCGACGCTTTCATG 37848 Query 8602 ATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAA 8661 || || | | ||| ||| |||| || || | ||||||||| | || || Sbjct 37849 ATCATGGGTTACGCCTTCGACAGCCCCGAGGCCAAGAAGCTCAACATCCAGATCTTCGAG 37908 Query 8662 ACGGTGTATTACGGCGCATTAGAAGCCAGC-TGTCAACTTGCCCGAGAATTGGGCACGTA 8720 ||| | || ||| ||| | || || | | || | || ||| || | || || || Sbjct 37909 ACGATCTACCACGCCGCTCTCGA-GCGATCGTGCGAGCTCGCCAAGGAGCTCGGGACCTA 37967 Query 8721 CGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGT 8780 ||| | |||| ||||||||| ||||| || ||||||||||| | ||| || Sbjct 37968 CGAGACATACGAGGGCAGCCCAACCAGCAAGGGCGAGCTGCAATACGACCTCTGGGGAGT 38027 Query 8781 CACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTT 8840 ||| |||| | | ||| | ||| ||| | || ||||| ||||| | |||| | Sbjct 38028 CACCCCCAGCGGACTCTGGGACTGGGCCGAGATCAAGCGCAACATTGCCGCACACGGTCT 38087 Query 8841 GCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAA 8900 || || || || || | || ||||||||||| |||| ||| || | || Sbjct 38088 CCGAAACTCCCTCCTGCTCGCCCCTATGCCCACCGCTTCGACAAGTCAGATTCTCGGCTT 38147 Query 8901 CAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGA 8960 |||||| | ||||||||| | ||| | |||| | ||| |||| ||| | |||||||| Sbjct 38148 CAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGACGTGTGCTCGCCGGCGA 38207 Query 8961 TTT 8963 || Sbjct 38208 GTT 38210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505392259409440