Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq866 118 9e-22 seq445 98.7 8e-16 seq279 82.4 6e-11 >seq866 Length=73677 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | ||||| || |||||||| ||||| ||| Sbjct 71479 CCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAG 71420 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| |||||||| || |||||| | |||||||||||||||||||| || Sbjct 71419 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGA 71360 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||| | || | | || | ||||||| | ||| || Sbjct 71359 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACC 71300 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | ||||| || || || || || ||||| |||||| Sbjct 71299 TCAAGAGTGATGGTCTTGCCAGTGAGCGTCTTGACGAAGATCTGCATA 71252 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | || || || || || || ||||| ||| Sbjct 66359 CCACCACGCAGGCGGAGGACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGGAA 66418 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || || | ||| || |||||| | |||||||||||||| ||||| || Sbjct 66419 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGG 66478 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| | || | | | || | ||||||| | ||||||| Sbjct 66479 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACGTTGTCGATCGTGTCTGATGATTCAACT 66538 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || || || || || ||||| |||||| Sbjct 66539 TCGAGTGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 66586 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | || | ||||| || | || || || |||||||| |||||||| Sbjct 66130 GCCACCGCGGAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGA 66189 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | |||| |||| || | ||| || |||||| | || | |||||||| ||||| || Sbjct 66190 CAGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGG 66249 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||| | || | | || | ||||||| | || || Sbjct 66250 AATGCCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATGGTGTCTGATGACTCCAC 66309 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || || || || ||||||||||||||| Sbjct 66310 CTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCATA 66358 >seq445 Length=91251 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || |||||||| || ||||||||| | | || ||||||||||||| || ||| Sbjct 7680 GTCGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCG 7621 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | |||||||| ||||| || || || | ||||| || || ||||||| | || Sbjct 7620 GCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTG 7561 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | || || || || || || || | ||||| || || || Sbjct 7560 ACGTTGTCAATGGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 7501 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 7500 TTGACGAAGATCTGCAT 7484 >seq279 Length=20706 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27031 ACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCT 27090 |||| | ||||| || | || || || || || || ||||||||| | |||| Sbjct 11534 ACCGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGAC 11593 Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 |||| |||||||| || |||||| | |||||||||||||| ||||| || | ||| || | Sbjct 11594 CGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCT 11653 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || ||||||| | || | || || | | ||| | | || || || || || | Sbjct 11654 TGTCCTGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGA 11713 Query 27211 TAGATTTGCCCGTCAGAGTTTTCAC 27235 | | ||||| || || || || || Sbjct 11714 TCGTCTTGCCGGTGAGGGTCTTGAC 11738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929366120864