Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq130 168 8e-37 seq356 105 8e-18 >seq130 Length=41321 Score = 168 bits (186), Expect = 8e-37 Identities = 553/848 (65%), Gaps = 25/848 (3%) Strand=Plus/Minus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 ||||| ||||| ||||||| | | ||||||| | || || || || | |||||| Sbjct 37628 TTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGTTGGAG 37569 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370 | ||| || || || | ||||||||||| ||| |||| || |||||||| ||| Sbjct 37568 CACTTGATGGTACCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAAAGC 37509 Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGC 111429 ||| | || | || ||||||||||| | | ||||| || | ||||| | | | | | Sbjct 37508 ATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCGAGAACGGCGTACCAAAGCTTTTGAGCC 37449 Query 111430 TGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487 | | || | |||| || || ||||| ||||||||| |||||| || || || Sbjct 37448 TTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAAT 37392 Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547 || || || | || | |||||| || || | | || || | || ||||||| Sbjct 37391 TCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGACCATTCT 37332 Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 || || || || ||||||||||| | ||| || ||||| |||| | ||||| || Sbjct 37331 CCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTCA 37272 Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 | || |||| || | || ||||| | | || |||||||| | || || Sbjct 37271 CGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCA 37212 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGA 111721 | |||||| ||||||| |||| |||| | || | ||||| ||| | || Sbjct 37211 GAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC---TGGACGCTTGTTGCCACCCTGG 37155 Query 111722 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 111781 | || ||||| || ||| ||| || ||||||||||| || | ||||| | || | Sbjct 37154 TCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGACA 37095 Query 111782 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC--AT-CA-TGGATGTGCATCCC 111837 || || || || ||| | | | | | ||| || || ||||||| | || Sbjct 37094 CCGTTAGTTCCGGCAAT----GTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 37039 Query 111838 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 111897 || || |||||| ||| ||| || || | | ||||| | ||||| || | Sbjct 37038 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCATC 36979 Query 111898 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACC 111957 ||| ||||| ||||| ||| || |||||||| ||||| || || | |||||||| Sbjct 36978 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 36919 Query 111958 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATG 112016 ||| ||||||||||| || | || || |||| ||| | | ||||| || ||| | Sbjct 36918 AGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGTAAG 36860 Query 112017 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076 | || | | | || ||| |||||||||||||| || || ||||||| ||||| Sbjct 36859 TGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCATGT 36800 Query 112077 ACTGTGGG 112084 || ||| Sbjct 36799 GTTGGGGG 36792 >seq356 Length=94465 Score = 105 bits (116), Expect = 8e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| |||||| || || || || |||||| ||||| Sbjct 84979 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 85038 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||| | ||| | || | | ||| || |||||||||||||| Sbjct 85039 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATG 85098 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 ||||| || ||||| |||| ||||| ||||| || Sbjct 85099 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAA 85136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024369411200