Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq130 188 9e-43 seq356 111 2e-19 >seq130 Length=41321 Score = 188 bits (208), Expect = 9e-43 Identities = 557/850 (66%), Gaps = 19/850 (2%) Strand=Plus/Minus Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778 || || || || |||| | ||||||| | | ||||||| || || |||||||||| | Sbjct 37634 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 37575 Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838 || || | ||| ||||| || | ||||||||| || ||||| ||| || |||||| Sbjct 37574 TTGGAGCACTTGATGGTACCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 37515 Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG 118898 ||||||||| | || | || |||||||| |||| || ||||| || | ||| | | Sbjct 37514 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCGAGAACGGCGTACCAAAGCTTT 37455 Query 118899 GCAGCTGGCACAGT--GGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956 ||| || || |||| || || ||||| ||||||||| |||||| || | Sbjct 37454 TGAGCCTTGACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCT 37397 Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016 | || || || || | | || | ||| || || || | ||||| | || |||| Sbjct 37396 CGAATTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGACC 37337 Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076 ||| || | || || ||||||||||| | ||| |||||||| || || |||||| Sbjct 37336 ATTCTCCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGA 37277 Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136 | || || || | || || | || || || | | || | || || | || Sbjct 37276 GCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGA 37217 Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAG 119190 || | |||||| || || | ||| | |||| | | ||| |||| ||| Sbjct 37216 CGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCAC 37160 Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250 |||||| || || | || ||| ||| || || |||||||| || | |||||| | | Sbjct 37159 CCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAG 37100 Query 119251 ATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308 | || || || || || || ||| | | | | || |||||||| | Sbjct 37099 AGACACCGTTAGTTCCGGCAATGTATGAGCC--GGTACCACGGATGCAGTGGATGTTGAG 37042 Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368 || || || || ||| ||| ||| ||||| | ||||| || ||||||| || Sbjct 37041 GCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCC 36982 Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428 |||||||||||| |||| | | || |||||||| ||||||||||| ||||||| Sbjct 36981 ATCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGT 36922 Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGT 119487 ||||||||||||||| || || | || ||| |||| ||| | | ||||| || || Sbjct 36921 ACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGT 36863 Query 119488 AGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547 | || || | | | || ||| |||||| || |||| | || ||||| | || Sbjct 36862 AAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCA 36803 Query 119548 TGTATTGGGG 119557 ||| |||||| Sbjct 36802 TGTGTTGGGG 36793 >seq356 Length=94465 Score = 111 bits (122), Expect = 2e-19 Identities = 174/244 (71%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| ||||||||||| ||| |||||| || || |||||| ||||| Sbjct 84979 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 85038 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 85039 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATG 85098 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAA 130194 ||||| || || || |||| || ||||| ||||| | | | | | | || | | Sbjct 85099 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAAGTG-GAGTCCTCGTCGTTGAT 85157 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGG-ACGGTCTGGATCGCTTCAA 130253 ||| || ||||||| ||||||| || || ||||| | ||||| || || || | Sbjct 85158 CCAGCGCAGGGCCCACTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATGGCGTCGA 85216 Query 130254 AGAG 130257 |||| Sbjct 85217 AGAG 85220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427686012320