Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq130 159 4e-34 seq356 118 1e-21 >seq130 Length=41321 Score = 159 bits (176), Expect = 4e-34 Identities = 529/813 (65%), Gaps = 21/813 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| || ||||| ||||||| || || |||| || || ||| ||| || | Sbjct 36792 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 36851 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 36852 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 36910 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| ||||||||||| | || |||||||| |||||||| || ||| ||||| | Sbjct 36911 TCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCTTCCTGGTCACCATGAAGGACG 36970 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 |||| ||| | || ||||| | ||||| | | || || ||| ||| ||||| Sbjct 36971 ACTCGATCGATGGCATCTACGACACTCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 37030 Query 104460 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 | || || || | ||||||| || || ||| | | | | | ||| || Sbjct 37031 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCATAC----ATTGCCGGA 37086 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || || ||| || | ||||| | || ||||||||||| || ||| ||| || ||| Sbjct 37087 ACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCCCGC 37146 Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || || | || | ||| ||||| | || | |||| |||| ||||||| Sbjct 37147 TACGTCGACCAGGGTGGCAACAAGCGTCCA---GGTGCCTTCGCCATCTACATTGAGCCC 37203 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 |||||| | || || | |||||||| || | | ||||| || | ||||||| Sbjct 37204 TGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTC 37263 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || ||| || ||||||| ||| || ||||| || || | ||||||||| |||| || Sbjct 37264 CGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAA 37323 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 | | || | ||||| || | || || | | || || |||||| | |||| | Sbjct 37324 CAAAACGGAGAATGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGTCTCGCTGATGTCTAC 37383 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG-AC 104868 || || || || || || || ||| ||||||||| || ||||| || | || || Sbjct 37384 GGCGACGAATTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGC-TCGCCGAAC 37442 Query 104869 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || ||| | | ||| | || ||||| || | || || |||||||| | || Sbjct 37443 CGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAGGCCCAGACGGAGACTGGCAACCC 37502 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | |||||||||||| ||||| |||| ||| || |||||||| | ||| || Sbjct 37503 TTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACCAAAAGAACCTCGGTACCAT 37562 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGA 105021 |||| | ||||| || || || || ||| |||| Sbjct 37563 CAAGTGCTCCAACCTGTGCACGGAGATCATGGA 37595 >seq356 Length=94465 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 ||||| ||||| || | || ||||| || ||||| ||||||||||| || || ||| Sbjct 85136 TTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTC 85077 Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917 | | || | |||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct 85076 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 85017 Query 94918 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || ||| || |||||||| || ||| || ||||| Sbjct 85016 CTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 84979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253713381280