Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq866 150 5e-31 seq691 145 2e-29 seq611 91.5 4e-13 >seq866 Length=73677 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | |||||||||||||| |||||||| || ||||| Sbjct 71483 CATACCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATC 71424 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || ||||| || ||||| ||||| || ||||| || Sbjct 71423 GGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGG 71364 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || |||||||| || | || ||||| || || | || |||| ||| Sbjct 71363 AGGAATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTC 71304 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| || || || || || || || |||||||| Sbjct 71303 CACCTCAAGAGTGATGGTCTTGCCAGTGAGCGTCTTGACGAAGATCTGCAT 71253 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || ||||| || || || ||||| ||||| || || ||||| Sbjct 66811 CATACCACCGCGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAATC 66870 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || || ||||| || || || || ||||| || || ||||| || || Sbjct 66871 AGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGG 66930 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || || |||| || |||| || Sbjct 66931 GGGGATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATCGTGTCTGATGACTC 66990 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || || | |||||| ||||| || || || |||||||||||||| Sbjct 66991 AACTTCCAGCGTGATTGTCTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 67041 Score = 131 bits (144), Expect = 5e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || ||||| ||||| || || || || | Sbjct 66351 TTTGCATACCACCACGCAGGCGGAGGACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGT 66410 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || ||||| || | || || || || ||||| ||||| || || | Sbjct 66411 AATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGT 66470 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || || || || ||||| || || | ||||| || || |||| || |||| Sbjct 66471 CCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTTACGTTGTCGATCGTGTCTGATG 66530 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| ||||| | ||||| || || || || || || || |||||||| Sbjct 66531 ATTCAACTTCGAGTGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 66585 Score = 120 bits (132), Expect = 9e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || | || ||||| || || || || ||||| Sbjct 66583 CATACCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATC 66642 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || ||||| ||||| || ||||| || || ||||| || || Sbjct 66643 GGAAAGGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGG 66702 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || | ||||| || || || | || |||| || Sbjct 66703 GGGGATACCCTCCTTGTCCTGAATCTTGGTCTTTACGTTGTCGATGGTGTCTGATGACTC 66762 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| | |||||| ||||| || || || || || |||||||| Sbjct 66763 CACCTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 66813 Score = 111 bits (122), Expect = 5e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | |||||||||||||| |||||||| || || || Sbjct 71255 CATACCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTC 71196 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || ||||| || ||||| || || || || || || Sbjct 71195 GGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGG 71136 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || ||||| || || || | || ||||| || || | || || | || Sbjct 71135 GGGAATGCCCTCCTTATCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTC 71076 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || || || | ||||| || || || || || || Sbjct 71075 AACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 71037 >seq691 Length=3285 Score = 145 bits (160), Expect = 2e-29 Identities = 462/711 (65%), Gaps = 14/711 (2%) Strand=Plus/Minus Query 349226 TATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGT 349285 || || |||||||| || ||||||||||| || || || | || || || || || ||| Sbjct 1736 TACTCCTGTGTTGCCGTATGGCAAAATGACCGGGTTGAGGTCATCGCCAACGACCAGGGT 1677 Query 349286 AACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCT 349345 ||| | ||||| || |||||||| || || ||||| | ||||| | || ||||| | Sbjct 1676 AACCGCACAACCCCTTCATACGTCGCCTTCACCGACTCAGAGCGCCTCATCGGTGACGCC 1617 Query 349346 GCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATT 349405 || || || || | || || || | || || || || || || |||||||| || Sbjct 1616 GCCAAGAACCAGACCGCCATGAACCCCCACAACACAGTCTTCGACGCCAAGCGACTCATC 1557 Query 349406 GGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGT- 349464 || | | || ||||| ||| || || | || || | || || | || Sbjct 1556 GGCCGCAAGTTCGCTGACTCCGAGGTACAGTCCGACATGAAGCACTGGCCCTTCAAGGTC 1497 Query 349465 -TGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAAAAA 349522 | |||| ||| |||||||| || |||| || || || || || || || | Sbjct 1496 ATCGACCAA-----GGTACCAAACCAATAATCCAGGTCGAGTACAAGGGCGAGACCAAGA 1442 Query 349523 CAATTTTTACCC--GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTG 349580 || || |||| || || | || | |||||| | | || ||| || | ||| | Sbjct 1441 CA---TTCACCCCTGAGGAGGTCTCCGCCATGGTTCTGCTCAAGATGCGCGAGACTGCCG 1385 Query 349581 AAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATG 349640 | || || | |||| | || | || || || | ||||| || ||||| || || | Sbjct 1384 AGGCCTACCTCGGTGGCTCCGTCAAGGACGCCGTCGTCACTGTTCCCGCCTACTTCAACG 1325 Query 349641 ATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAA 349700 | | || || || || || || || || | |||||| || | || || | ||| Sbjct 1324 ACTCTCAACGACAGGCCACCAAGGACGCCGGTACCATTGCCGGTCTCAACGTCATGCGAA 1265 Query 349701 TGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAG 349760 | || || || ||||| || || || ||||| || || ||||| || | | | || | Sbjct 1264 TCATCAACGAGCCCACCGCCGCTGCCATTGCTTACGGTCTTGACAAGAAGGGCGAGGGCG 1205 Query 349761 aaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACAC 349820 | || || |||| || || || || || || || || || ||||| || || || || Sbjct 1204 AGAAGAACGTTCTCATCTTCGACTTGGGAGGAGGCACGTTCGATGTCTCGCTCCTCACCA 1145 Query 349821 TTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAG 349880 | || ||||| || || || || || || || || ||||| || || | ||||| || | Sbjct 1144 TCGAGGAGGGCATATTCGAGGTCAAGGCCACCGCCGGTGACACCCACTTGGGTGGCGAGG 1085 Query 349881 ATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG 349931 | || || || |||||||| | || || || | || || ||||| |||| Sbjct 1084 ACTTCGACAACCGTCTCGTAACCCACTTCGTCCAGGAGTTCAAGCG-CAAG 1035 >seq611 Length=85925 Score = 91.5 bits (100), Expect = 4e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || || || ||||| || || || || || || || Sbjct 39126 ACCACCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 39067 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || || || || || || || || ||||| || || || || || || || Sbjct 39066 AAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGG 39007 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| ||||| || ||||||||||| | || || || || || || || | || || Sbjct 39006 AATACCTTCCTTGTCCTGAATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCAC 38947 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||||| || || || || || || || |||||||| Sbjct 38946 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 38899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515235529400516