Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq130 279 6e-70 seq81 98.7 1e-15 >seq130 Length=41321 Score = 279 bits (308), Expect = 6e-70 Identities = 480/689 (70%), Gaps = 6/689 (1%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| || || ||| | || ||||| |||||||||||||| ||||||| ||| Sbjct 36880 AAGTACTTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATG 36939 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || ||||||||||| | |||||||| ||||||||||| ||||||||||| || ||| Sbjct 36940 TCATCGTGCTTCCTGGTCACCATGAAGGACGACTCGATCGATGGCATCTACGACACTCTC 36999 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTC 53446 ||| || ||| ||| |||| | | ||||| ||||| || || | | || Sbjct 37000 AAGACCTGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATC 37059 Query 53447 CGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATG 53506 |||| | |||| || || || || ||||| ||| | | || |||||||||||| Sbjct 37060 CGTGGTACCGGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATG 37119 Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGG 53565 || ||||||||||||||||| ||||| |||||| |||||||||| ||||| | ||| Sbjct 37120 CTTCGCGTCTTCAACAACACCGCCCGCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGT 37179 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 | | |||||||||||| | ||||| |||||| | ||| | | ||||| ||||| || | Sbjct 37180 G-CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAG 37238 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTC 53684 ||| || || | || ||| | || |||||| || || ||| || || ||||| | Sbjct 37239 GAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTAC-GCCCTTTGGATCC 37297 Query 53685 CGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG 53744 | ||| | |||||| | || || | ||| || |||| ||||||||||| || Sbjct 37298 CTGACTTGTTCATGAAGCGAGTCGAACAAAACGGAGAATGGTCGCTGATGTGCCCCGCCG 37357 Query 53745 AGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACG 53804 |||||||||| ||| | ||||||||| || || || | | | || || ||||| Sbjct 37358 AGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAATTCGAGGCTCTCTACGAGAAGTACG 37417 Query 53805 CAGTTCAGGGCCGCTACAAGAAGAA-GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTC 53863 | |||| || | | | ||| |||||||| | || | ||| | || | ||| Sbjct 37418 AGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTC 37476 Query 53864 AAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAG 53923 || |||| |||||| || | || | |||| |||||||| | | |||| ||| Sbjct 37477 GAGGCCCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAG 37536 Query 53924 AGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||||| |||||| |||| |||||| Sbjct 37537 TCGAACCAAAAGAACCTCGGTACCATCAA 37565 Score = 95.1 bits (104), Expect = 1e-14 Identities = 308/464 (66%), Gaps = 27/464 (6%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 || || || |||||||| || | || || ||||| ||||| ||||| |||||| | Sbjct 38083 GGTCTCCGAAACTCCCTCCTGCTCGCCCCTATGCCCACCGCTTCGACAAGTCAGATTCTC 38142 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 ||| ||||||| || ||||| ||||||| |||| | ||| || || || || Sbjct 38143 GGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGACGTGTGCTCGCC 38202 Query 55598 GGTGAGTTTGTCATGATCAACAA---GCACCT-CGTCAAGGACCTGCAG-AAGATCAACA 55652 || ||||| | ||||| || || ||| | | | || ||| || Sbjct 38203 GGCGAGTTCCAAGTCGTCAACCCTTGGCTGCTGCGTGA-GCTTGTCGAGCAAGGTCT--- 38258 Query 55653 AGTGGAACCCGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATC 55709 ||||||| |||||| |||| || || || | | |||| || || ||||||| Sbjct 38259 -GTGGAACGAGCAGATGAAGAACCGCATCATAGCCC---ACGGCGGCTCGATCCAGAACG 38314 Query 55710 TG---GAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGA 55766 || | ||||| || |||||| | ||| ||| ||||||||||| | |||| Sbjct 38315 TGCCCGGCATTCCCGACCGCATCAAGGCACTGTACAAGACAGTGTGGGAGATCTCGCAGA 38374 Query 55767 AGAGTC-TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTG 55825 || ||| | || |||||| || || || ||||| | |||| ||| || || |||| Sbjct 38375 AG-GTCATCATCGACATGGCCGCCGACCGAGGTGCCTTCATCTGCCAATCTCAAAGTCTG 38433 Query 55826 AACATCTTCATGGA-GAATCCTTCACTGGCCAAGTT--GAGCTCGATGCACTTTTACGGG 55882 |||||| | | | | | || | |||||| || |||| |||||||| ||||| Sbjct 38434 AACATCCACCTCCAAGCACCCAGCTTTGGCCAGCTTACGAGC---ATGCACTTCTACGGC 38490 Query 55883 TGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 |||||||||||| | |||||||| | ||||| || || ||||| Sbjct 38491 TGGAAGAAGGGATTGAAGACGGGAACATACTACCTCCGAACCCG 38534 >seq81 Length=49796 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/204 (73%), Gaps = 10/204 (5%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTG--GCCGCATCCTTGCCACC--TGCCAGCCGCGTTCCAAA 152084 ||||| ||||| || ||||| ||||| ||||||||||| || || || || || || Sbjct 17568 GTGAAAATGTAACG--AGCTGAGGCCGCGTCCTTGCCACCCATGGCA--CGAGTGCCGAA 17513 Query 152085 CTGTCC-AGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAAT 152143 ||| || | |||| |||||| |||| ||||| ||||| ||| | |||||||||| Sbjct 17512 CTGACCGATAGGGG-CGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAAT 17454 Query 152144 TCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGT 152203 | ||||||||| |||| ||| || ||||| ||||| || || ||||| | | | Sbjct 17453 TTACAATCGTGGATTGCAAACTTTGCTCGCCGTGATGATATGCGGTGTGCTCGCCCACAT 17394 Query 152204 ATCCCGCCAACTGCGCCACCTTCA 152227 | || ||||| || || |||| || Sbjct 17393 AACCAGCCAATTGGGCAACCTGCA 17370 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAG--ACGCGTACCGAATT 117362 |||||||||||||||| || || ||||||||||| || | ||| || ||||| | Sbjct 17568 GTGAAAATGTAACGAGCTGAGGCCGCGTCCTTGCCACC--CATGGCACGAGTGCCGAACT 17511 Query 117363 GTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422 | || | || | | || ||| ||||| ||||| |||| ||||||||| || | Sbjct 17510 GACCGATAGGGGCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAATTTA 17451 Query 117423 CAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGC 117482 ||||||| ||| | || ||| || || ||||| || || ||||| |||| || | Sbjct 17450 CAATCGTGGATTGCAAACTTTGCTCGCCGTGATGATATGCGGTGTGCTCGCCCACATAAC 17391 Query 117483 CCGCCAGCTGAGCCACCTTCA 117503 | |||| || || |||| || Sbjct 17390 CAGCCAATTGGGCAACCTGCA 17370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209351325600