Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq866 118 7e-22 seq445 100 2e-16 seq279 91.5 9e-14 >seq866 Length=73677 Score = 118 bits (130), Expect = 7e-22 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||||||| ||||| ||||| ||||| || || |||| ||||| || Sbjct 66839 TGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGC 66898 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||| |||||||| || | ||||||||||| |||| || Sbjct 66899 TTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATC-TT 66957 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || |||||| ||| ||||||| || || || || ||||| Sbjct 66958 CGTCTTCACGTTGTCGATCGTGTCTGATGACTCAACTTCCAGCGTGATTGTCTTGCCGGT 67017 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || |||||||||||||| Sbjct 67018 GAGGGTCTTGACAAAAATCTGCAT 67041 Score = 105 bits (116), Expect = 4e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || |||||| ||||||||||||||| ||||| ||||| || || | || || Sbjct 71689 ACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 71630 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | || || ||||| || || || || ||||||||||| || | ||||||||||| | Sbjct 71629 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 71570 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || || || ||| || ||| ||||| ||||| || | || || || || Sbjct 71569 ATC-TTCGTCTTGACGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTCTT 71511 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | || || || || |||||||| Sbjct 71510 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 71481 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || ||| ||||||||||||||| || || || || || || Sbjct 66140 AGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGGGTGCGG 66199 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || | || || ||||| || || || |||||||||||||| || | |||||| Sbjct 66200 CCGTCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCC 66259 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||||| || || | || |||||| |||||| || | || Sbjct 66260 TTGTC-CTGAATCTTTGTCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCGAGTGT 66318 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || || ||||| || ||||| Sbjct 66319 GATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 66357 Score = 95.1 bits (104), Expect = 8e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || ||||| ||||||||||||||| || || || || || || |||| ||| Sbjct 71233 ACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 71174 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || ||||| || || | |||||||||||||| || | |||||||| ||| | Sbjct 71173 AGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCTTGG 71114 Query 34618 ATCTT 34622 ||||| Sbjct 71113 ATCTT 71109 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | ||| |||||| || ||||| ||||| ||||| || || |||| || Sbjct 66605 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 66664 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || ||||| || || | ||||| |||||||| || | ||||||||||| || Sbjct 66665 AGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC-CTG 66723 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | || || || ||| | || |||||| |||||| || | || || || || Sbjct 66724 AATCTTGGTCTTTACGTTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATTGTCTT 66783 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | || || || || |||||||| Sbjct 66784 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 66813 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || ||||| ||||||||||||||| ||||| || || || || |||| || Sbjct 71461 ACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCG 71402 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || || || ||||| || || | ||||||||| ||||| || | ||||||||||| Sbjct 71401 AGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTC 71346 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || ||||| |||||| || ||||| ||||| ||||| || || | || || Sbjct 66377 ACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 66436 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | || || ||||| || || | ||||||||||||||| || | ||||||||||| | Sbjct 66437 AACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 66496 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || || || ||| | || |||||| || ||||| | || || || || Sbjct 66497 ATC-TTGGTCTTTACGTTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTT 66555 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || || || || |||||||| Sbjct 66556 GCCAGTGAGGGTCTTGACGAAGATCTGCAT 66585 >seq445 Length=91251 Score = 100 bits (110), Expect = 2e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | || | ||||| || || ||||| ||||| || || || Sbjct 7710 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGAT 7651 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| ||||||| || || || ||||| || || | ||| |||||||| || || Sbjct 7650 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 7591 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || || || ||| | ||| ||||| | ||| || Sbjct 7590 ATGCCCTCCTTGTCTTGGATC-TTGGTCTTGACGTTGTCAATGGTGTCGGAGGACTCTAC 7532 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712 || | ||| || || || || || | || || || || ||||||||| |||| Sbjct 7531 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCATGATGAT 7478 >seq279 Length=20706 Score = 91.5 bits (100), Expect = 9e-14 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||||||| |||||| || ||||| || || || || || || |||| || Sbjct 11542 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 11601 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || ||||| || || | ||||||||||||||| || | || |||||||| | Sbjct 11602 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGG 11661 Query 34618 ATCTT 34622 ||||| Sbjct 11662 ATCTT 11666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725871634476