Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq866 84.2 2e-11 >seq866 Length=73677 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| | || ||| ||||| || | || || |||||||| ||| | || Sbjct 66720 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTCATCTTCGCCGGAAAGCAACTCGAG 66661 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| |||| | | ||||||||||||||||| || ||| ||| ||||| ||||| | Sbjct 66660 GACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACATTGCACTTGGTCCTC 66601 Query 28003 CGTTTGCGTGGCGG 28016 || ||||||| || Sbjct 66600 CGCCTGCGTGGTGG 66587 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| ||| || ||||| || || || ||||| || || ||||| Sbjct 71574 GACAAGGAGGGCATTCCTCCGGACCAACAACGATTGATCTTCGCCGGCAAGCAGTTGGAG 71633 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| | | |||||||||||||| ||||| ||| |||| | || ||||| | Sbjct 71634 GATGGCCGCACCCTTTCCGATTACAACATTCAAAAGGAGTCCACTCTTCACTTGGTCCTC 71693 Query 28003 CGTTTGCGTGGCGGC 28017 || ||||||| ||| Sbjct 71694 CGCCTGCGTGGTGGC 71708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355858184365044