Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq866 100 2e-16 >seq866 Length=73677 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| ||||| || || ||||| | ||| || || |||| |||||||| Sbjct 66839 TGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGC 66898 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || ||||| ||||||||||| | ||| | | ||| |||||| ||| ||| Sbjct 66899 TTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 66958 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 || | ||| | | | ||| || ||||| || |||| |||||| | || || || Sbjct 66959 -GTCTTCACGTTGTCGATCGTGTCTGATGACTCAACTTCCAGCGTGATTGTCTTGCCGGT 67017 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || || || ||||| || ||||| Sbjct 67018 GAGGGTCTTGACAAAAATCTGCAT 67041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540511495436