Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq356 111 1e-19 >seq356 Length=94465 Score = 111 bits (122), Expect = 1e-19 Identities = 278/418 (67%), Gaps = 16/418 (4%) Strand=Plus/Plus Query 4284 AAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCG 4343 ||||| || || ||||||| | ||| || || ||||| || || || ||||| || ||| Sbjct 84712 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 84771 Query 4344 TTGTAATGTTTTTCACACTTT----AGAGCTACAAGCAATCGGTCAGCTACAAATTCTAT 4399 ||||| || || ||| || || ||||| |||| ||||||||| |||||||| || Sbjct 84772 TTGTAGTGCTT----CACGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGAT 84827 Query 4400 ATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACA-GGTAGCGCGTATGTCA 4458 ||||||||||| ||| ||| || || || ||| ||| || || || | |||| Sbjct 84828 GTACTGGCTCATAAGTCGTGCGTTCATGCCGATCAAT-GAACAGGGAAGAGCATCGGTCA 84886 Query 4459 AAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATC---TTTAG 4515 || | || || || || || | || | || || | ||| | | Sbjct 84887 GGAAAGCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGGTGCG 84946 Query 4516 ATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGT 4575 | || || | || | || | || || ||||| || |||| ||| |||| Sbjct 84947 GCCGCTTCTT---GAGGTGGCTGAAGAGCAAGCAAGCAAAGTCGGTGTGCAGACCCTCGT 85003 Query 4576 CTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCC 4635 ||| ||| || || ||||| || || || | |||||||| | ||| | ||| || |||| Sbjct 85004 CTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCC 85063 Query 4636 AAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTAC 4693 | || || | ||| || || || || ||||| ||||| |||||||| ||||| || || Sbjct 85064 AGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAGCAAAGGCAAC 85121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427044541063676