Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq356 113 6e-20 seq130 87.8 2e-12 >seq356 Length=94465 Score = 113 bits (124), Expect = 6e-20 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 || || ||||| || || ||||| || |||| || || | ||||| || || ||| Sbjct 84973 AAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTG 85032 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 ||||||||||| || ||||| || |||||||| || || | |||||||| || || ||| Sbjct 85033 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 85092 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCGTTG 48314 || ||||| |||||||| ||||| || || | ||| | || ||| | |||| | Sbjct 85093 AAGATGCCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAAGTGGAGTCCTCGTCG 85152 Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTAC 48352 | ||||| || | ||||| || ||||| | ||| || Sbjct 85153 TTGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGAC 85190 >seq130 Length=41321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 221/335 (66%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || ||||| || || | |||||| | | || ||||| || ||| Sbjct 37407 GTAGAGAGCC--TCGAATTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGG 37350 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 ||||||| ||||| || || | || | ||||| ||||| || | ||||| ||||| Sbjct 37349 CACATCAGCGACCATTCTCCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAA 37290 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 || || || || || |||| || || || || || ||||| | || ||| Sbjct 37289 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 37230 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 || ||||| | | ||||| ||||| || || | || || || | | || || || Sbjct 37229 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 37170 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || ||||| || | || | ||||||||| || | || | | ||| || | Sbjct 37169 TTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACG 37110 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 ||||||||||| || || ||||| | ||| || Sbjct 37109 ATACCGTTAGAGACACCGTTAGTTCCGGCAATGTA 37075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660359774080