Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq866 168 2e-36 seq445 165 2e-35 seq611 145 2e-29 seq279 140 8e-28 >seq866 Length=73677 Score = 168 bits (186), Expect = 2e-36 Identities = 161/205 (79%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||||||||| |||||| Sbjct 66810 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAGGTGGAGTCATCAGAC 66751 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| || || ||||| ||||||||||| Sbjct 66750 ACCATCGACAACGTAAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 66691 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| || ||||| || || | || ||| ||||||| ||| || Sbjct 66690 CGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATC 66631 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || ||| |||| |||| Sbjct 66630 CAGAAGGAGTCCACATTGCA-CTTG 66607 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || ||| |||||| Sbjct 66582 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACACTCGAAGTTGAATCATCAGAC 66523 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || |||||||||||||| || Sbjct 66522 ACGATCGACAACGTAAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAACAG 66463 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||| | || ||||| | || ||| ||||||| ||| || Sbjct 66462 CGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 66403 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || ||||| ||||| |||| Sbjct 66402 CAGAAGGAGTCAACTCTGCA-CTTG 66379 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| || ||||||||| |||||| Sbjct 71256 CAGATCTTCGTCAAGACGCTCACTGGCAAGACCATCACTCTTGAGGTGGAATCATCAGAC 71315 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| || || || |||||||| || || Sbjct 71316 ACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCTCCGGATCAACAG 71375 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| |||||||| || || | || || ||||||| ||| | Sbjct 71376 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGATTACAACATT 71435 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 71436 CAAAAGGAGTCTACTCTTCA-CTTG 71459 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| |||||||||||| || ||| Sbjct 71484 CAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACACTCGAGGTGGAATCATCCGAC 71543 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || ||||||||||| ||| Sbjct 71544 ACCATTGATAACGTCAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAA 71603 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || ||| | || ||||| | || ||| ||||||| ||| | Sbjct 71604 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATT 71663 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 71664 CAAAAGGAGTCCACTCTTCA-CTTG 71687 Score = 152 bits (168), Expect = 1e-31 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||| ||||| || ||| |||||||| || Sbjct 67258 CGTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCCGACACCATTGA 67199 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 || ||||| ||||| |||||||| || || ||||||||||||||||| || ||||| Sbjct 67198 CAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTTAT 67139 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 |||||||||||| |||||||| || || | || | | || || ||| |||| || || Sbjct 67138 CTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGGA 67079 Query 178112 ATCAACACTGCATCTTGTT 178130 || ||||| || |||||| Sbjct 67078 GTCCACACTTCACCTTGTT 67060 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| || || || ||||| ||||||||||| |||||| Sbjct 66354 CAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAGTCATCAGAC 66295 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||||||||||||| || || || ||||||||||| || Sbjct 66294 ACCATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 66235 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || ||| | || || || | || || | || || ||| | Sbjct 66234 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAACATT 66175 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || |||||||| |||| Sbjct 66174 CAAAAGGAGTCCACACTGCA-CTTG 66151 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || || || ||||| || || || || |||||| Sbjct 67038 CAGATTTTTGTCAAGACCCTCACCGGCAAGACAATCACGCTGGAAGTTGAGTCATCAGAC 66979 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 66978 ACGATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 66919 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||||| || || || | |||||| | ||||| ||| || Sbjct 66918 CGCCTTATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAACATC 66859 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || ||||| Sbjct 66858 CAAAAGGAGTCCACCCTCCACCTTGT 66833 Score = 122 bits (134), Expect = 2e-22 Identities = 146/197 (74%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||||||||| || ||| ||||| ||||| Sbjct 71036 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 71095 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 || ||||| ||||| || || || || || || || |||||||| || || || || Sbjct 71096 CAATGTCAAGACCAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAACAGCGCCTCAT 71155 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 |||||||||||| ||||| || || || | || || |||| || ||| | ||||| || Sbjct 71156 CTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATTCAAAAGGA 71215 Query 178112 ATCAACACTGCATCTTG 178128 || || || || |||| Sbjct 71216 GTCTACTCTTCA-CTTG 71231 >seq445 Length=91251 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || |||||||| || || |||||||||||||| || ||| ||| Sbjct 7487 CAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCCGAC 7546 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| || ||||| || || ||||| || ||||| ||| Sbjct 7547 ACCATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAACAA 7606 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||||||||| || | || || |||| || ||| || Sbjct 7607 CGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAACATC 7666 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || || || Sbjct 7667 CAAAAAGAATCGACCCTCCACCTCGT 7692 >seq611 Length=85925 Score = 145 bits (160), Expect = 2e-29 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||||||||||||||| || ||| Sbjct 38902 CAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 38961 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 ||||||| |||||| || ||| ||||||||||| ||||| || || |||||||| || Sbjct 38962 TCCATCGACGCCGTCAAGACCAAA-ATTCAGGACAAGGAAGGTATTCCCCCGGACCAACA 39020 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 ||||| ||||||||||| || |||||||| || || | |||||| | || || ||| | Sbjct 39021 GCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAACAT 39080 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || || || || Sbjct 39081 CCAGAAGGAGTCGACCCTCCACCTCGT 39107 >seq279 Length=20706 Score = 140 bits (154), Expect = 8e-28 Identities = 150/197 (76%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || || ||||| || || ||||||||||||||||| || || ||| ||||||| Sbjct 11739 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 11680 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 |||||| ||||| |||||||| ||||| ||||| |||||||| || || || || Sbjct 11679 CGCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAACAGCGTCTCAT 11620 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||| || |||||||| || || | ||||| |||| || ||| |||| || || Sbjct 11619 CTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGA 11560 Query 178112 ATCAACACTGCATCTTG 178128 || || || || |||| Sbjct 11559 GTCCACTCTCCA-CTTG 11544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203716209032568