Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq24 109 6e-19 >seq24 Length=169626 Score = 109 bits (120), Expect = 6e-19 Identities = 293/448 (65%), Gaps = 0/448 (0%) Strand=Plus/Minus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 |||||||||||| || | || ||||| | |||||| || ||||| || || | Sbjct 86541 CACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATAAGCTCATTGGAGAACGTGAGA 86482 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| || || ||||| | |||||| || | ||||| || || || ||||| Sbjct 86481 CCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCAGAGAAGAAG 86422 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 |||||||| |||| || ||||| | | || |||||| | | | || || | | Sbjct 86421 ATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCGAAGGCGGACTCCTTGTCAGAG 86362 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTA 16441 ||||| | | |||| || || || | || || ||| ||||| || ||||| | Sbjct 86361 ATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCTCGATGGCGTCG 86302 Query 16442 AACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATT 16501 || | | ||| | || ||| | || ||||| || || || | ||| | Sbjct 86301 AAAAGGTGCTCGCGCTGCTTGGGATCCTTGATGTACGTGTCGATGAGCAGCGAGTATGTC 86242 Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| |||||||| || ||||| || || |||||||| || ||||| || Sbjct 86241 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGTGCCTCGGCGGCC 86182 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || | | || || || | |||||||| |||||||| ||||| || || Sbjct 86181 TGGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGTTCACGATGCCGTCCGAGGCGGCG 86122 Query 16622 AAAAACGCCAATATGTGCTTAATGAAAT 16649 || || || | | |||| ||||||| Sbjct 86121 AAGAAGGCGAGCACGTGCGAGATGAAAT 86094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511409439280320