Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq24 109 6e-19
>seq24
Length=169626
Score = 109 bits (120), Expect = 6e-19
Identities = 293/448 (65%), Gaps = 0/448 (0%)
Strand=Plus/Minus
Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261
|||||||||||| || | || ||||| | |||||| || ||||| || || |
Sbjct 86541 CACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATAAGCTCATTGGAGAACGTGAGA 86482
Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321
|| ||||| || || ||||| | |||||| || | ||||| || || || |||||
Sbjct 86481 CCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCAGAGAAGAAG 86422
Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381
|||||||| |||| || ||||| | | || |||||| | | | || || | |
Sbjct 86421 ATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCGAAGGCGGACTCCTTGTCAGAG 86362
Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTA 16441
||||| | | |||| || || || | || || ||| ||||| || ||||| |
Sbjct 86361 ATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCTCGATGGCGTCG 86302
Query 16442 AACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATT 16501
|| | | ||| | || ||| | || ||||| || || || | ||| |
Sbjct 86301 AAAAGGTGCTCGCGCTGCTTGGGATCCTTGATGTACGTGTCGATGAGCAGCGAGTATGTC 86242
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|| ||||| |||||||| || ||||| || || |||||||| || ||||| ||
Sbjct 86241 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGTGCCTCGGCGGCC 86182
Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
|| || || | | || || || | |||||||| |||||||| ||||| || ||
Sbjct 86181 TGGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGTTCACGATGCCGTCCGAGGCGGCG 86122
Query 16622 AAAAACGCCAATATGTGCTTAATGAAAT 16649
|| || || | | |||| |||||||
Sbjct 86121 AAGAAGGCGAGCACGTGCGAGATGAAAT 86094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511409439280320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |