Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq460 86.0 5e-12 >seq460 Length=141031 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| |||||||| ||||||| || || || | ||||| ||||| ||||| Sbjct 61130 GTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCG 61189 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | || |||||||| |||||| ||| Sbjct 61190 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTC 61249 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| || | || |||||||||||||| | || Sbjct 61250 ACATTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAGAGTC 61309 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 61310 TTAACGAAGATTTGCAT 61326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422255206483616