Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq460 122 6e-23 >seq460 Length=141031 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||| || Sbjct 61100 CCACCGCGTAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAA 61159 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| ||||| ||||| |||||||||||| || Sbjct 61160 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 61219 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | || | ||| ||||| Sbjct 61220 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACC 61279 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| ||||| || || ||||| ||||| Sbjct 61280 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTAACGAAGATTTGCAT 61326 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/217 (70%), Gaps = 14/217 (6%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | ||| || || ||||| ||||| || ||||| || ||| | || |||| Sbjct 61812 AGGTGGAGAGTGCTCTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGT 61871 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| || || ||||| ||||||||||| || | | ||||||||| ||| Sbjct 61872 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGGATC 61931 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG---TCC-ACC-------GTGA 34352 || ||| || | |||||| ||||| ||||| ||| ||| |||| Sbjct 61932 TTAGCCTT--GACGTATTGTCGAAT-GGTCGTACCGACGAACTCCGACCGTCGTAGGTGA 61988 Query 34353 TGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| |||| | ||| || |||||||||||||| Sbjct 61989 TGGTCTTGTCGGTCAAAGTCTTGACAAAGATCTGCAT 62025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068944546560