Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq24 89.7 1e-12 >seq24 Length=169626 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 7/198 (4%) Strand=Plus/Plus Query 157253 TTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATG 157312 |||| |||||||| || | ||||| || ||||||||||| |||||||| || || | | Sbjct 83619 TTGC-GTACTCGGAGACGCGTTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATGAGG 83677 Query 157313 TCCATCCACTCGAATGGGT---TGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTC 157369 ||||| | ||||| |||| |||||| || || ||| |||| ||| ||| | Sbjct 83678 TCCATGAAGTCGAACGGGTTCGTGGCGCGGTAGT---GCTTCTCGTTCCCGAGCGCGACG 83734 Query 157370 AGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATG 157429 ||| |||||| || |||| ||| |||| |||| | || | || |||||| Sbjct 83735 AGCAGACGGTCCGCTACGAACTCGATATACTGGCACATGAGGTCGGCGTTCATGCCGATG 83794 Query 157430 AGCGCGACGGGAAGCGCC 157447 |||| ||| ||||||||| Sbjct 83795 AGCGAGACCGGAAGCGCC 83812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073755724077568