Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq24 93.3 8e-14 >seq24 Length=169626 Score = 93.3 bits (102), Expect = 8e-14 Identities = 157/226 (69%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGA----TGCAAAGCAATAACGATTTGG 101906 |||||||||||||| | | |||||| | | |||| || ||| | | || || | Sbjct 86326 CATCAAGAAGAAGGCGGACTGGGCTTTGCACTGGATCTCTGACAAGGAGT-CCGCCTTCG 86384 Query 101907 CGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCAT 101966 |||| | | || || || || || || || || |||||||| |||| | || || | Sbjct 86385 CGGAGCGGCTCGTGGCTTTCGCGGCTGTGGAGGGTATCTTCTTCTCTGGTTCCTTTGCCT 86444 Query 101967 CCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCA 102026 |||| |||||| ||||||| | || | |||| |||||||| | |||||||||| | | Sbjct 86445 CCATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCCGGTCTCACGTTCTCCAATGAGCTTA 86504 Query 102027 TTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | || | ||||| || | || |||||| || ||| |||| || Sbjct 86505 TCTCGCGTGACGAGGGCATGCACACCGACTTCGCGTGCTTGCTTTT 86550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989574161061080