Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq403 86.0 5e-12 >seq403 Length=43082 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/214 (70%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 20889 GGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAA 20948 || ||||||||||| || | ||||||| | || | |||||||| | | ||| Sbjct 18250 GGGAACGGACGCGGCTCCCGCTCGAGCTGAACCTTGAGCGCTTCAACGTGATCGCGGTAG 18309 Query 20949 ACGTGGGCGTCACCCAAGGTGT-GCACAAAGTCTCCCGGGGTCAG--GCCCGTGACGTGA 21005 ||||| ||||| ||||| ||| | || ||| | ||| | | |||| ||||| Sbjct 18310 ACGTGCGCGTC-GCCAAGCTGTATTATCAA--CTCGTGAGGTTCGGTGTCCGTAACGTGC 18366 Query 21006 GCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATG 21065 || | || || || || |||||||| ||| ||||| || || | |||||||| | | Sbjct 18367 GCCACCATATGGGTGAGCAGGGCGTAAGAGGCAATGTTGAAGGGAATACCGAGGCCAAGG 18426 Query 21066 TCGGCGGACCTCTGGTACAGCTGGCAGGACAGCT 21099 |||||||| | |||||||| | ||||||| |||| Sbjct 18427 TCGGCGGAGCGCTGGTACATCAGGCAGGAGAGCT 18460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427771954308480