Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq24 107 1e-18 seq274 98.7 7e-16 >seq24 Length=169626 Score = 107 bits (118), Expect = 1e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || |||||||| || || ||||| | || || ||||| || || ||||| ||||||||| Sbjct 84108 GCATTTGCGGCAGTCGAGGGCGTGTTCTTCTCCGGGTCGTTCGCCGCCATTTTCTGGCTG 84049 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || | | ||||| |||||| |||| || |||||| | || ||||| ||||| Sbjct 84048 AAGAAGCGGGGGTTGATGCCGGGGTTGACGTTCTCTAACGAGCTTATCAGCCGAGACGAG 83989 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 ||| | ||| |||||||| ||| | || || Sbjct 83988 GGTATGCACACCGACTTTGCGTGTCTCCTCTT 83957 >seq274 Length=162771 Score = 98.7 bits (108), Expect = 7e-16 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 33535 AAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCA 33594 |||| |||||||||| | ||| | || |||||| |||| ||||||||||| || Sbjct 148906 AAATTCGTCAAGATCCGCGTCCGCTCCACGCGTATACCACAGATCGGCGACAAGTTCGCT 148847 Query 33595 TCGT-TCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTT 33653 ||| |||||| | ||||||| || ||| || | ||| |||| |||||||||||| Sbjct 148846 TCGCGTCACGGTC-AGAAGGGTACCATCGGTATCACCTACCGCCAGGAGGACATGCCGTT 148788 Query 33654 CACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCAT 33713 |||||| || ||| | || ||| | |||||||||| || || | ||||| || || Sbjct 148787 CACGGCGGAGGGCATCACGCCCGACATCATCATCAACCCCCACGCCATTCCCTCTCGTAT 148728 Query 33714 GAC 33716 ||| Sbjct 148727 GAC 148725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356230230920728