Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq460 82.4 8e-11 >seq460 Length=141031 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||| ||| | || | ||||| || ||||| || |||||||| || || Sbjct 61100 CCACCGCGTAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAA 61159 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || |||||||| || || || |||| || || ||||| ||||| || Sbjct 61160 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 61219 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 61220 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACC 61279 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||||||||||| || || ||||| ||||||||| Sbjct 61280 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTAACGAAGATTTGCATA 61327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059188179200