Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq24 107 3e-18
>seq24
Length=169626
Score = 107 bits (118), Expect = 3e-18
Identities = 287/435 (66%), Gaps = 3/435 (1%)
Strand=Plus/Plus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
||| || || ||| ||||| ||||||||||| || || || ||||| || ||||| |
Sbjct 83965 ACACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTCAA 84024
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| ||||| | || ||||| || ||||| || |||| || || ||||| || |||||
Sbjct 84025 CCCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAGAA 84084
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTG-GCGCT-GTCATG 50135
| || || ||||| ||||| || || || ||||| || | |||| |||| ||| |
Sbjct 84085 CACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTCCGCAAACACTGAACGCTCGTCCTC 84144
Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195
||||| ||||| || |||||||| | ||| || || || || ||||| |
Sbjct 84145 AATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCGTC 84204
Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255
|| || | |||| || || | ||| || ||||| | || ||| |
Sbjct 84205 GAACAGGAACGCGCGTTCAGCGGGGTCCTTGATATACGTGTCGATGAGCAGCGAGTACGT 84264
Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315
||||| || | || || || ||||| || ||||| || || | |||||||
Sbjct 84265 CTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCGTAAAAGCAGCGCGCCTCGGCGGC 84324
Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375
||| || || || | || || || | | ||| || ||||| || ||||| ||| ||
Sbjct 84325 CTGTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATGCCGTCCGAGGCGGC 84384
Query 50376 AAAAAACGCCAATAC 50390
|| || || | |||
Sbjct 84385 GAAGAAAGCGAGTAC 84399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718261832792640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |