Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq24 89.7 1e-12 >seq24 Length=169626 Score = 89.7 bits (98), Expect = 1e-12 Identities = 118/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 269122 TTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTT 269181 || |||||| || | || || ||||| || || || || | ||||| || ||||| || Sbjct 84125 TTGCGGAGA--GGCTGGTCGCATTTGCGGCAGTCGAGGGCGTGTTCTTCTCCGGGTCGTT 84068 Query 269182 TGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGA 269241 ||||| || || ||| ||||||| | || | ||||| || || || ||||||||||| Sbjct 84067 CGCCGCCATTTTCTGGCTGAAGAAGCGGGGGTTGATGCCGGGGTTGACGTTCTCTAACGA 84008 Query 269242 ATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 | || ||| | ||||| ||| | ||| |||||| || ||| Sbjct 84007 GCTTATCAGCCGAGACGAGGGTATGCACACCGACTTTGCGTGT 83965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151386952221408