Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq443 87.8 5e-12 >seq443 Length=126294 Score = 87.8 bits (96), Expect = 5e-12 Identities = 165/239 (69%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 363736 TACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 ||||| ||| |||||| || ||||| || || | || || ||||| || ||||| || Sbjct 85260 TACAT-CGCTGGCACAAACGGTTACTCAAACGGCATTGTGCCGATGCTACGCGTGTTCGA 85318 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | || || | || ||||| |||||||| || || || || ||||| | || Sbjct 85319 CGCCACCGCTCGCTATGTCGATCAGGGTGGCAACAAACGACCCGGAGCTTTTGCCGTCTA 85378 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 |||||| |||| || | ||||| || ||||| || || || ||| || || Sbjct 85379 CGCCGAGCCATGGCATGGAGACGTCTTTGAATTCCTTGACCTTCGTAAGAACCATGGCAA 85438 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 ||| ||| ||||||||||||| | ||||| || || ||||| | |||| |||| ||| Sbjct 85439 AGAAGAAGTGCGTGCACGTGACTTATTCTACGCTCTCTGGGTGCCCGACC-TTTTGTGA 85496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303340641406832