Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq768 140 2e-28 seq665 140 2e-28 seq484 140 2e-28 seq481 140 2e-28 seq746 136 3e-27 seq585 136 3e-27 seq716 118 7e-22 seq352 118 7e-22 seq215 116 2e-21 seq727 104 2e-17 seq673 104 2e-17 seq639 104 2e-17 seq343 104 2e-17 seq204 104 2e-17 seq358 102 5e-17 seq671 93.3 3e-14 seq485 84.2 1e-11 >seq768 Length=1026 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 581 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 640 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 641 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 675 >seq665 Length=1019 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 745 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 804 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 805 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 839 >seq484 Length=1087 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 264 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 205 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 204 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 170 >seq481 Length=1070 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1011 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 952 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 951 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 917 >seq746 Length=1019 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||| |||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 663 AAGCCCGCTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 722 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 723 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 757 >seq585 Length=1161 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||| ||||||||| || |||||||| Sbjct 557 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATACTAGATAGGGACAGTGGGAATCTCGT 616 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 617 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 651 >seq716 Length=1224 Score = 118 bits (130), Expect = 7e-22 Identities = 88/100 (88%), Gaps = 10/100 (10%) Strand=Plus/Plus Query 25902 AAGCCC--GTTCCCTTGGC-TGTGGTTT-CGCTAGATAGTAGATAGGG------GGTAAT 25951 |||||| ||||||||||| |||||||| ||||||||||||||||||| || ||| Sbjct 982 AAGCCCCGGTTCCCTTGGCGTGTGGTTTTCGCTAGATAGTAGATAGGGACAAGTGGGAAT 1041 Query 25952 CTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||||||| |||||||||||||||||||||||||||| Sbjct 1042 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 1081 >seq352 Length=1251 Score = 118 bits (130), Expect = 7e-22 Identities = 87/100 (87%), Gaps = 10/100 (10%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTT-GGCTGTGGTTTCG--CTAGATAGTAGATAGGG-------GGTAAT 25951 |||||||||||||| ||||||||||||| ||||||||||||||||| || | | Sbjct 1004 AAGCCCGTTCCCTTTGGCTGTGGTTTCGGTCTAGATAGTAGATAGGGACGAGTGGGAAGT 1063 Query 25952 CTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||||||| |||||||||||||||||||||||||||| Sbjct 1064 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 1103 >seq215 Length=246195 Score = 116 bits (128), Expect = 2e-21 Identities = 183/262 (70%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCG 6291 ||||| | ||||| || || || || || || || |||||| ||||||| | || || | Sbjct 154185 CCAAGATTGAGGGCAAAGGCAATGGCATCAAGACTGTCATTCCCAACATGTCCGACGTGG 154244 Query 6292 CTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCG 6351 | || ||| | | || ||||||| || || || | ||||||||||| || |||| Sbjct 154245 CGCGCGCCCTCAGTAGGCCGCCCACCTATCCCACCAAGTTCTTCGGGTGCGAGCTCGGCG 154304 Query 6352 CTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTG 6411 | |||||| || || | || ||||| |||| |||||| ||||| ||||| || | Sbjct 154305 CCCAGACGTCCTTCGACGAGAAGAACGACCGCTACATCGTGAACGGGGCGCATGACGCCA 154364 Query 6412 CCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCG 6471 ||||||| || ||||||||| || || ||||| ||||| || || |||| Sbjct 154365 AAAAGCTGCGCGAGCTACTTGACGTTTTCATCGAGAAGTTCGTGCTTTGCAAGGCATGCA 154424 Query 6472 ATAACCCGGAGACCGAGCTTAT 6493 | || || ||||| || || || Sbjct 154425 AGAATCCCGAGACGGACCTCAT 154446 >seq727 Length=1034 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 861 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 920 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 921 GCCAATATTTAGCTTTA 937 >seq673 Length=1073 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 189 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 130 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 129 GCCAATATTTAGCTTTA 113 >seq639 Length=1106 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 233 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 174 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 173 GCCAATATTTAGCTTTA 157 >seq343 Length=14047 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 12938 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 12879 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 12878 GCCAATATTTAGCTTTA 12862 >seq204 Length=1013 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 216 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 275 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 276 GCCAATATTTAGCTTTA 292 >seq358 Length=1007 Score = 102 bits (112), Expect = 5e-17 Identities = 80/92 (87%), Gaps = 8/92 (9%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA--ATCTCGTTAA 25959 ||||||||| | |||||| ||||||||||||||||||||| || |||||||||| Sbjct 109 GCCCGTTCCTT--GCTGTG--TTCGCTAGATAGTAGATAGGGACNGTGGGATCTCGTTAA 54 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||||||||||| Sbjct 53 TCCATTCATGCGCGTCACTAATTAGATGACGA 22 >seq671 Length=9579 Score = 93.3 bits (102), Expect = 3e-14 Identities = 62/69 (90%), Gaps = 5/69 (7%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 631 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 690 Query 25957 TAATCCTTT 25965 |||||| || Sbjct 691 TAATCCATT 699 >seq485 Length=1062 Score = 84.2 bits (92), Expect = 1e-11 Identities = 67/77 (87%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTA-TCGGTCTCGCG 20007 |||||||||| || |||| | |||||||||||||||||||||||||| |||||||| || Sbjct 695 CTCTCTTCAA-GTGCTTTCAATCTTTCCCTCACGGTACTTGTTCGCTACTCGGTCTCTCG 753 Query 20008 -GTAATATTTAGCCTTA 20023 ||||||||||| ||| Sbjct 754 CCTAATATTTAGCTTTA 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944032236856