Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq24 84.2 3e-11 >seq24 Length=169626 Score = 84.2 bits (92), Expect = 3e-11 Identities = 282/435 (65%), Gaps = 3/435 (1%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| || || ||| ||| | ||||||||||| || || | ||||| || ||||| | Sbjct 83965 ACACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTCAA 84024 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| | || ||||| || ||||| || |||| || || || || || ||||| Sbjct 84025 CCCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAGAA 84084 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCG-GCGCT-GTCATG 32836 | || || ||||||||||| || | || ||||| || | || | |||| ||| | Sbjct 84085 CACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTCCGCAAACACTGAACGCTCGTCCTC 84144 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| ||||| || |||||||| | ||| || || || || || || | Sbjct 84145 AATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCGTC 84204 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 || || | |||| || || | ||| || || || | || ||| | Sbjct 84205 GAACAGGAACGCGCGTTCAGCGGGGTCCTTGATATACGTGTCGATGAGCAGCGAGTACGT 84264 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 ||||| || | || || || || || || ||||| ||||| | ||||||| Sbjct 84265 CTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCGTAAAAGCAGCGCGCCTCGGCGGC 84324 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 |||||| || || | || || || | | ||| || ||||| || ||||| ||| || Sbjct 84325 CTGTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATGCCGTCCGAGGCGGC 84384 Query 33077 AAAAAACGCCAATAC 33091 || || || | ||| Sbjct 84385 GAAGAAAGCGAGTAC 84399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625853769600