Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq460 118 9e-22 >seq460 Length=141031 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| ||| | ||||| || || ||||||| || || || | | Sbjct 61326 ATGCAAATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCG 61267 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || || || |||||||||||||| || ||||| || Sbjct 61266 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 61207 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| |||||| | || || |||||| Sbjct 61206 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTTTCGGACTACAAC 61147 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || || ||| Sbjct 61146 ATTCAGAAGGAGTCGACC 61129 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||||||||| || || || || || ||||| || ||||| ||||| Sbjct 61933 AAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTTGCTGGCAAG 61874 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409 || | |||||| || ||| |||||||||| |||||||| || || Sbjct 61873 CAACTGGAGGATGGTCGTACCCTCTCCGATTATAACATTCAGAAGGA 61827 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 22322 GTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCA 22381 ||||||| ||||| || || |||||||| || ||||| || ||| | ||||| ||||| Sbjct 62150 GTATTCCTCCCGACCAGCAGCGTCTTATCTTCGCCGGGAAGCAGCTTGAGGACGGCCGCA 62091 Query 22382 CCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCG 22441 | | || || ||||||||||| || || ||||| | ||| | || | || | |||| Sbjct 62090 CTCTTTCTGACTACAACATTCAGAAGGAGTCCACGCTTCATCTCGTCCTCCGTCTTCGCG 62031 Query 22442 GAGGT 22446 ||||| Sbjct 62030 GAGGT 62026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419724030422440