Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq443 96.9 3e-15 >seq443 Length=126294 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 ||||||||| || || || || ||| |||||| | || || ||||| || || ||| Sbjct 85257 TCCTACATCGCTGGCACAAACGGTTACTCAAACGGCATTGTGCCGATGCTACGCGTGTTC 85316 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 || | | || ||||| || || |||||||| | | || |||| || ||| Sbjct 85317 GACGCCACCGCTCGCTATGTCGATCAGGGTGGCAACAAACGACCCGGAGCTTTTGCCGTC 85376 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || |||||| ||||| | ||||| | ||| | ||||| || |||||||| ||| Sbjct 85377 TACGCCGAGCCATGGCATGGAGACGTCTTTGAATTCCTTGACCTTCGTAAGAACCATGGC 85436 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 || || | | | || | ||| | |||||||||||||||||||| |||||||| Sbjct 85437 AAAGAAGAAGTGCGTGCACGTGACTTATTCTACGCTCTCTGGGTGCCCGACCTTTT 85492 Score = 93.3 bits (102), Expect = 4e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 94528 GCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATT 94587 |||||||| ||||||||| ||||||| ||||||| || ||||| |||||||||||| Sbjct 85824 GCCAAGTCAAACCAGCAGAACCTCGGCACGATCAAGTCGTCCAATCTCTGCACCGAGATT 85883 Query 94588 GTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCT 94628 |||||||| | ||||| || |||| ||||| || || || Sbjct 85884 GTCGAGTACTCGTCTCCCGATGAGACGGCTGTCTGCAATCT 85924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718401184960