Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq24 150 3e-31
>seq24
Length=169626
Score = 150 bits (166), Expect = 3e-31
Identities = 372/559 (67%), Gaps = 4/559 (1%)
Strand=Plus/Minus
Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973
|| || | |||||| |||||| ||||| |||||||| || ||||| | ||| |||||
Sbjct 86550 AAAAGCAAGCACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATAAGCTCATTGGAG 86491
Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033
| |||| || ||||| | || ||| |||||||| || |||| ||||| | |||
Sbjct 86490 AACGTGAGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCA 86431
Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093
|| ||||| |||||||| ||||| || |||||||||| ||| | || | || |
Sbjct 86430 GAGAAGAAGATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCGAAGGCGGACTCC 86371
Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153
||||| | |||| ||||| || |||||||| |||||| || || ||||
Sbjct 86370 TTGTCAGAGATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCTCG 86311
Query 160154 ACGGCGTTAAACAATCTG-TCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTT 160212
| ||||| || || || || ||| ||| ||||||||| || | || |||
Sbjct 86310 ATGGCGTCGAA-AAGGTGCTCGCGCTGCTTGGGATCCTTGATGTACGTGTCGATGAGCAG 86252
Query 160213 CGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGC 160272
|||||| | || | ||| | || || || ||||| ||| |||||| | ||
Sbjct 86251 CGAGTATGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGTGC 86192
Query 160273 CTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332
||| ||| ||||| | | ||||| | | || || | || || | |||||
Sbjct 86191 CTCGGCGGCCTGGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGTTCACGATGCCGTC 86132
Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCT 160392
| ||| || ||||| || | |||||| ||||||||||| | ||| || | |||||| |
Sbjct 86131 CGAGGCGGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACGCTCATCGTCGTTGAGGCG 86072
Query 160393 CTT-TTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAG 160451
|| |||| | ||| | ||| | || | || | ||| || || |||| | ||
Sbjct 86071 GTTGTTCCAATCGTG-GAGGTCCTTGGAAAGGTCCATCTCCTCGGCAGTCCAGAATGAAG 86013
Query 160452 CCTGAGCAGTTTTGTACAT 160470
||| ||| | ||||||||
Sbjct 86012 CCTCAGCCTTCTTGTACAT 85994
Score = 123 bits (136), Expect = 4e-23
Identities = 313/472 (66%), Gaps = 12/472 (3%)
Strand=Plus/Plus
Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973
|| ||||| |||||||||||| ||||| |||||||| || ||| | |||||| ||
Sbjct 83957 AAGAGGAGACACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAG 84016
Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033
| | | |||||||| | ||| ||| || ||||| |||||||| || || | |||
Sbjct 84017 AACGTCAACCCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCG 84076
Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA-AGAG-GCGT 160091
|| || | ||||| || |||||||| || || |||||||| |||| | | ||
Sbjct 84077 GAGAAGAACACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTCCGCAAACACTGAACGC 84136
Query 160092 TGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCT 160151
| ||| | |||| | ||||| || |||||||| ||| ||||| ||| |
Sbjct 84137 T--CGTCCTCAATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGT 84194
Query 160152 CGACGGCGTTAAACAATCTGTCCTGCTCCTTCA----CATCCTTGATCAGAGTAGCAATC 160207
||| ||||| |||| | || | |||| |||||||| || | ||
Sbjct 84195 CGATGGCGTCGAACA----GGAACGCGCGTTCAGCGGGGTCCTTGATATACGTGTCGATG 84250
Query 160208 AGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATAT 160267
||| ||||||| | || | ||||||||| ||||| ||||| ||| ||| || |
Sbjct 84251 AGCAGCGAGTACGTCTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCGTAAAAGCAG 84310
Query 160268 GTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAAC 160327
|||||| ||| ||||| | | ||||| | | ||||| | || || |
Sbjct 84311 CGCGCCTCGGCGGCCTGTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATG 84370
Query 160328 CCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGT 160379
||||| | ||| || |||||||| | |||| |||||||| || | |||||
Sbjct 84371 CCGTCCGAGGCGGCGAAGAAAGCGAGTACGTAGGAGATGAAGTGGCGCTCGT 84422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795147486994560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |