Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq24 347 1e-90 seq460 114 1e-20 seq55 98.7 1e-15 seq121 91.5 1e-13 >seq24 Length=169626 Score = 347 bits (384), Expect = 1e-90 Identities = 457/631 (72%), Gaps = 7/631 (1%) Strand=Plus/Minus Query 132814 TGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGC 132873 |||||||| |||||||| || |||| ||||| | | | | ||| | || || | Sbjct 86622 TGCTCGATAGCGACCGCCTCAGTGATGATTTGACGGATGATCTCCGGGTGGGGGCGCCTC 86563 Query 132874 ACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATG 132933 | ||| |||| | |||||| || |||||| |||| ||||||||| | || || Sbjct 86562 TTGAGATGACTGAAAAGCAAGCACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATA 86503 Query 132934 AGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCG 132993 || || ||| ||| || | |||||||| |||||||| || |||||||| || |||| | Sbjct 86502 AGCTCATTGGAGAACGTGAGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAG 86443 Query 132994 GCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCG 133053 || || || || ||||||| ||||| || |||||||||||||| || ||||| || Sbjct 86442 GCAAAGGAACCAGAGAAGAAGATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCG 86383 Query 133054 AACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCAC 133113 || | || || ||| | ||||||| ||| ||||| || ||||| | |||| ||| Sbjct 86382 AAGGCGGACTCCTTGTCAGAGATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAA 86323 Query 133114 GGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGG 133171 || ||||| |||||||||| || || | | | || | ||| | | ||| | Sbjct 86322 GGAATCGTCTCGATGGCGTCGAA--AAGGTGCTCGCGCTGCTTGGGATCCTTGATGTACG 86265 Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231 |||||||||| ||| || | |||||||| | ||||||||| ||| || ||||||| Sbjct 86264 TGTCGATGAGCAGCGAGTATGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGT 86205 Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291 | ||||| || |||||| | |||| || || | | ||| |||||||| || || |||| Sbjct 86204 AGAAGCAGCGTGCCTCGGCGGCCTGGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGT 86145 Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT 133351 | ||||||||||| ||||||||| ||||| ||||||||| ||||||||| ||||| | Sbjct 86144 TCACGATGCCGTCCGAGGCGGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACGCTCAT 86085 Query 133352 TGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408 |||||| | ||| | ||| ||| | ||||||||| ||||||| ||||||| | | Sbjct 86084 CGTCGTTGAGGCGGTTGTTCCAATCGTGGAGGTCCTTGGAAAGGTCCATCTCCTCGGCAG 86025 Query 133409 TCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||| || || ||||| || || |||||||| Sbjct 86024 TCCAGAATGAAGCCTCAGCCTTCTTGTACAT 85994 Score = 266 bits (294), Expect = 3e-66 Identities = 395/553 (71%), Gaps = 13/553 (2%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| |||| |||||||| | | || || ||||| ||| ||||| Sbjct 83966 CACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTCAAC 84025 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || ||||| | || || || || ||||| || ||||||||||| || || ||||| Sbjct 84026 CCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAGAAC 84085 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACG-TGGCTTCTT-TGCTGG 133072 ||||||||||| ||||| || || ||||| | ||| | ||| || || | || Sbjct 84086 ACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTCCGCAAACACTGAACGCTCGTCCT-- 84143 Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGT 133132 | |||||||||| |||||| || ||||| | || ||||| || || |||||||||| Sbjct 84144 CAATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCGT 84203 Query 133133 TCAACA--AACGGAGTTTCTCTTCCGAGGAACGC-ACGTAGGTGTCGATGAGGGTCGAAT 133189 |||| |||| ||| || || | | || ||||||||||| ||| | Sbjct 84204 CGAACAGGAACGCGCGTTCAG---CGGGGTCCTTGATATACGTGTCGATGAGCAGCGAGT 84260 Query 133190 ACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGA 133249 || | |||||||| || ||||| || ||| || |||||||||||||| ||||||||| Sbjct 84261 ACGTCTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCGTAAAAGCAGCGCGCCTCGG 84320 Query 133250 CCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGG 133309 | |||| || || | || ||| |||||||| ||||| ||||| ||||||||||| || Sbjct 84321 CGGCCTGTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATGCCGTCCGAGG 84380 Query 133310 CGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT---CAAGCGCT 133366 ||||||| || || || |||| |||||| ||||||||||| |||| | | | Sbjct 84381 CGGCGAAGAAAGCGAGTACGTAGGAGATGAAGTGGCGCTCGTTCGCGTTGAGCTTGTAGT 84440 Query 133367 CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGG 133426 |||||| ||| |||| |||| | ||||||||||||||| |||||||| | || Sbjct 84441 TCCAGTCCATGAGGTCGTTGGCGAGGTTGATCTCCTCGACGGTCCAGAACGACGCTTGGG 84500 Query 133427 CTTTTTTGTACAT 133439 | || |||||||| Sbjct 84501 CGTTCTTGTACAT 84513 >seq460 Length=141031 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| |||||||| |||| |||||| | | Sbjct 61326 ATGCAAATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCG 61267 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || || ||||||| Sbjct 61266 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 61207 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || || | ||||| || ||||||||| Sbjct 61206 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTTTCGGACTACAAC 61147 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| |||| || || | || || ||| Sbjct 61146 ATTCAGAAGGAGTCGACCCTTCACCTCGTCCTTCGT 61111 >seq55 Length=161460 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 |||||| ||||||| ||||| || || | ||||||||| ||||| || || | |||||| Sbjct 8312 ATTCCCCCCGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACC 8371 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGC 38468 |||| ||||||||||||||| ||||| | || || || | ||||| ||| || | || Sbjct 8372 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTTCGTCTGCGTGGT 8431 Query 38469 GG 38470 || Sbjct 8432 GG 8433 >seq121 Length=508097 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 |||||| ||||||| ||||| || || | ||| ||||| ||||| || || | |||||| Sbjct 178630 ATTCCCCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACC 178689 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||| ||||||||||||||| ||||| |||| || || Sbjct 178690 CTCAGCGACTACAACATCCAGAAGGAGTCGACCCTCCA 178727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167948323840