Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq24 244 2e-59
>seq24
Length=169626
Score = 244 bits (270), Expect = 2e-59
Identities = 393/559 (70%), Gaps = 13/559 (2%)
Strand=Plus/Minus
Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184
|||| ||| || ||||| |||||| ||| ||||| || ||| ||| | ||||||||
Sbjct 86547 AGCAAGCACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATAAGCTCATTGGAGAAC 86488
Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244
|||||| ||||| | || | || ||||||||||| || | || || || ||||||
Sbjct 86487 GTGAGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCAGAG 86428
Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304
|||||||| |||||||| |||||||| || ||||| ||| |||| | | | ||||
Sbjct 86427 AAGAAGATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCGAAGGCGGACTCCTTG 86368
Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364
|| ||||||||| | |||||||| ||||||||||||||||| || |||||||| |||
Sbjct 86367 TCAGAGATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCTCGATG 86308
Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCG-TCCGCAACATAGGT---AGTGAGCAGCTT 48420
|| ||| || | || || || | || | ||| | || || ||||||||
Sbjct 86307 GCGTCGAAAAGGTGCTCGCGCT-GCTTGGGATCCTTGATGTACGTGTCGATGAGCAGC-- 86251
Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480
| ||| |||| ||||| | ||||| || ||||||||| ||||||||| | ||
Sbjct 86250 -GAGTATGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGTGC 86192
Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATC 48540
||| |||| || || ||||||| | ||| | || ||||| || || || || ||
Sbjct 86191 CTCGGCGGCCTGGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGTTCACGATGCCGTC 86132
Query 48541 TGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC 48600
|| || || |||||||| || || || | |||||| ||||| | || | |||| ||
Sbjct 86131 CGAGGCGGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACGCTCATCGTCGTTGAG-GC 86073
Query 48601 ----ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656
||||| | || | ||| ||| ||||||| || || |||||||||| || |
Sbjct 86072 GGTTGTTCCAATCGTGGAGGTCCTTGGAAAGGTCCATCTCCTCGGCAGTCCAGAATGAAG 86013
Query 48657 CGAGTGCTTTTTTGTACAT 48675
| || || ||||||||
Sbjct 86012 CCTCAGCCTTCTTGTACAT 85994
Score = 214 bits (236), Expect = 3e-50
Identities = 394/571 (69%), Gaps = 15/571 (3%)
Strand=Plus/Plus
Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182
|||| | || |||||||| |||||| || ||||| |||||||| ||| |||| ||||
Sbjct 83958 AGAGGAGACACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGA 84017
Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242
| | || ||||| | ||||| || || ||||||||||| || ||||| || || |
Sbjct 84018 ACGTCAACCCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGG 84077
Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGA---AGCGT 48299
||||||| | |||||| |||||||| || ||| |||||||| | ||| | | ||
Sbjct 84078 AGAAGAACACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTC-CGCAAACACTGAACG- 84135
Query 48300 TCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359
|| ||| |||||| | ||||||||| |||||||| ||| || || || || |
Sbjct 84136 -CTCGTCCTCAATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGT 84194
Query 48360 CTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCA 48416
| ||||| ||| || | || ||| | | |||| | ||| || ||||||
Sbjct 84195 CGATGGCGTCGAACAGGAACGCGCGTTCAGCGGGGTCCTTGATATACGTGTCGATGAGCA 84254
Query 48417 GCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCC 48476
|| | |||| |||| |||||||||||||| || ||||||||| ||||| ||| |
Sbjct 84255 GC---GAGTACGTCTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCGTAAAAGCAGC 84311
Query 48477 TGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCC 48536
||||| |||| || || | ||||| | ||| | |||||||| || || || |
Sbjct 84312 GCGCCTCGGCGGCCTGTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATGC 84371
Query 48537 CATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA 48596
| || || || || ||||| || || || | | ||| ||||||||||| | |||
Sbjct 84372 CGTCCGAGGCGGCGAAGAAAGCGAGTACGTAGGAGATGAAGTGGCGCTCGTTCGCGTTGA 84431
Query 48597 G--AGCA-TTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGG 48653
| | | |||||| || | ||| ||| | |||| | || || || |||||||| |
Sbjct 84432 GCTTGTAGTTCCAGTCCATGAGGTCGTTGGCGAGGTTGATCTCCTCGACGGTCCAGAACG 84491
Query 48654 ACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
|||| | || || |||||||| ||||||
Sbjct 84492 ACGCTTGGGCGTTCTTGTACATCTGCCATAT 84522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931523764131840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |