Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq118 251 9e-62 seq460 163 4e-35 seq81 150 2e-31 seq92 134 2e-26 seq112 100 4e-16 seq55 95.1 2e-14 >seq118 Length=375891 Score = 251 bits (278), Expect = 9e-62 Identities = 546/811 (67%), Gaps = 12/811 (1%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||| ||||| || |||| || || || |||||||| || |||||||| || ||||| Sbjct 276135 GCTCTCCGTCGTCTCCGGACCGCTTGCGAGCGTGCCAAGCGCACTCTCTCGTCGGCGGCT 276194 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | | | ||||| || || | | || || || |||||||| || | || ||| Sbjct 276195 CAGACCACGATCGAGATCGACTCCCTTTACGAGGGTATCGACTTCTACACCTCGATCACC 276254 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| || || || ||| | | || | || | | | || || || || Sbjct 276255 CGTGCGCGGTTCGAGGAGCTCTGCCAAGACCTCTTCCGCAGCACCCTTGAGCCCGTCGAG 276314 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || || || || ||||| || ||||| | || | || |||||||| || || Sbjct 276315 AAGGTCCTCCGCGATGCGAAGATCGACAAGTCCCAAGTCCACGACATTGTCCTCGTCGGT 276374 Query 196301 GGATCAACCCGTATTCCGAAGAT--TCAACAGATGCTTTCTAGCTTCTTCAATAATAAAG 196358 || || || ||||| || || |||| | | |||| ||||||||| || | Sbjct 276375 GGTTCTACTCGTATCCCCCGTATCGTCAA--GCTCGTTTCCGACTTCTTCAACGGCAAGG 276432 Query 196359 ATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTG 196418 | ||||| | |||||||| || || || || || || ||||| ||||||||||||| Sbjct 276433 AGCCCAACAAGTCCATCAACCCCGACGAGGCCGTCGCGTACGGTGCCGCCGTTCAGGCTG 276492 Query 196419 CTATTCTCTCAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTG 196475 | || ||| | |||| ||| | | || || || || || || || ||||| | Sbjct 276493 CCATCCTCACGGGTG---ACACGTCTGAGAAGACTCAGGACCTCCTTCTGCTCGATGTCG 276549 Query 196476 CACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGA 196535 | || | || || ||| | || || || ||||||||||||||| | || | | | Sbjct 276550 CGCCGCTCTCGCTCGGTATCGAGACCGCTGGTGGTGTTATGACTCCTCTCATCAAGCGTA 276609 Query 196536 ACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAG 196595 |||| || | ||||| |||||| | | |||| || ||||| ||||| || || || | Sbjct 276610 ACACCACCGTCCCGACGAAGAAGTCAGAGATCTTCTCGACGTACTCCGACAACCAGCCCG 276669 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTG 196655 |||| | || || || || || || || || | || | ||||| ||| | || || | Sbjct 276670 GTGTGCTCATCCAGGTCTACGAGGGTGAGCGTGCGCGGACGAAGGACAACAACCTCCTCG 276729 Query 196656 GAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTT 196715 | | ||||| | || || ||||| | |||||| | |||||||| ||||| | || Sbjct 276730 GCAAGTTCGAGCTCACCGGCATTCCTCCCGCACCCCGTGGTGTTCCTCAGATCGAGGTCA 276789 Query 196716 GCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCA 196775 ||||||||| ||||| || || || || |||||| | || || ||| | | |||| Sbjct 276790 CCTTCGATATCGACGCCAACGGTATCCTCAACGTCTCGGCGTCAGATAAGACGACCGGCA 276849 Query 196776 AATCTGAAAAG-ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 | || ||| | || || ||||| |||||||| || || || |||||||| || || Sbjct 276850 AGTC-GAACCGCATCACCATCACCAACGACAAGGGTCGTCTCTCGAAGGAGGAGATCGAG 276908 Query 196835 CGTATGGTTCAAGATGCGGAAAAGTACAGGG 196865 || ||||| || || || ||||||| || Sbjct 276909 CGCATGGTCTCGGAGGCCGAGAAGTACAAGG 276939 Score = 181 bits (200), Expect = 1e-40 Identities = 255/358 (71%), Gaps = 0/358 (0%) Strand=Plus/Plus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 |||| || || ||||| || |||||| | | ||||||||||||| || || |||| | Sbjct 275648 CTCCTGAGGAGATTTCCTCGATGGTGCTCACGAAGATGAAGGAGATCGCCGAGTCTTACC 275707 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | ||| ||||| | ||| ||| | || || || || ||||||| || || |||| Sbjct 275708 TCGGTGGCACTGTCAGCTCTGCCGTTATCACCGTCCCCGCCTACTTCAACGACTCGCAAC 275767 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809 | || ||||||||||| || | | | || || ||||| ||| ||| | || || || | Sbjct 275768 GTCAAGCGACAAAGGATGCGGGTACCATCGCCGGTCTCAACGTCCTTCGTATCATTAACG 275827 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATG 195869 | || || || ||||| || || || ||||| |||||||| | | || || | Sbjct 275828 AGCCCACGGCCGCTGCCATCGCCTACGGTCTCGACAAGAAGGCTCAGGGCGAGCGCAACG 275887 Query 195870 TATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTG 195929 | | ||||| || ||||| |||||||| || |||||||| || || | || || | | Sbjct 275888 TCCTCATCTTCGACCTCGGCGGTGGTACCTTCGATGTCTCGCTCCTGACCATCGAGGAGG 275947 Query 195930 GTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || ||||| || ||||| || ||||||||||| || || |||||||| || ||||| Sbjct 275948 GCATCTTCGAGGTCAAGGCCACCGCTGGTGATACCCACCTTGGTGGTGAGGACTTCGA 276005 Score = 122 bits (134), Expect = 1e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 || || ||||||||||| |||||||| || ||||| ||| | || ||||| || ||||| Sbjct 275295 TGCGTCGGTGTATGGCAGAATGATCGCGTCGAGATCATCGCCAACGACCAGGGTAACCGC 275354 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || || || || || || || || || || | || || | | || ||||| || || Sbjct 275355 ACGACGCCCTCATATGTCGCGTTCACCGACACCGAGCGGTTGATCGGTGATGCGGCCAAG 275414 Query 195452 AATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGC 195511 || ||| || |||||||| ||| || ||||| |||||||||||||| || |||||| Sbjct 275415 AACCAGGTCGCGATGAACCCCCACAACACCGTCTTCGACGCGAAGCGTCTCATCGGTCGC 275474 Query 195512 AAGTT 195516 ||||| Sbjct 275475 AAGTT 275479 >seq460 Length=141031 Score = 163 bits (180), Expect = 4e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || || || || || || ||||| |||||||| |||| Sbjct 61331 GTGGTATGCAAATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGT 61272 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| ||||| ||||| || | || || ||||| || || ||||| || || || |||| Sbjct 61271 CGTCGGACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCG 61212 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || || || || ||||| || ||||| || || || | || | Sbjct 61211 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTTTCGGACT 61152 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| || || ||||| || || | || || |||||| Sbjct 61151 ACAACATTCAGAAGGAGTCGACCCTTCACCTCGTCCTTCGTCTACGCGGTGGT 61099 Score = 107 bits (118), Expect = 3e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| ||||| ||||| |||||||| || || || |||||||||||||| ||||| Sbjct 62309 AGCATGCAGATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCC 62250 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || || || || |||||| ||||||||||||| || || ||||| || Sbjct 62249 TCGGATACCATTGATAACGTCAAAGCCAAGATCCAGGACAAGGAGGG 62203 >seq81 Length=295634 Score = 150 bits (166), Expect = 2e-31 Identities = 255/366 (70%), Gaps = 5/366 (1%) Strand=Plus/Plus Query 195624 AATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAAT 195683 |||| | ||||| || || || | ||||| || |||||||||||||| || || | Sbjct 151628 AATTCACCCCCGAGGAGATCTCCGCCATGGTTCTGGGCAAGATGAAGGAGACCGCCGAGT 151687 Query 195684 CTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATT 195743 ||| | | ||| || || | | || ||||| || || ||||| || |||| ||| Sbjct 151688 CTTACCTCGGTCGCACCGTCACTCACGCCGTTGTTACCGTCCCTGCCTATTTCAACGATG 151747 Query 195744 CACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTA 195803 | || || |||||||| ||||| || | | | ||||| ||||| | || | || | Sbjct 151748 CTCAGCGTCAGGCGACCAAGGATGCCGGTACCATTGCCGGTCTCCAGGTCCTCCGTATCA 151807 Query 195804 TCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGA-T 195862 |||| || || || ||||| || || || || ||||| |||||| |||| | ||| | Sbjct 151808 TCAACGAGCCTACCGCGGCGGCCATCGCCTACGGTCTCGACAAG---AAGGGTGGAGAGT 151864 Query 195863 AAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATT 195922 | |||| ||| |||||||| |||||||| || || ||||| || ||| ||| Sbjct 151865 CGCAGATCATTG-TCTACGATCTCGGCGGTGGTACCTTCGACGTCTCCCTGCTCTCTATC 151923 Query 195923 GAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGAT 195982 || | |||| | ||||| || ||| || |||||||| || || || |||||||| || Sbjct 151924 GACGATGGTGTTTTCGAGGTCTTGGCCACCGCTGGTGACACCCACCTTGGTGGTGAGGAC 151983 Query 195983 TTCGAT 195988 || ||| Sbjct 151984 TTTGAT 151989 >seq92 Length=356105 Score = 134 bits (148), Expect = 2e-26 Identities = 467/721 (65%), Gaps = 32/721 (4%) Strand=Plus/Minus Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 ||| ||||| ||||||| ||||| || || | ||||| ||||| |||| | | || || Sbjct 89784 TGTTCCTGCGTACTTCAACGATTCGCAGCGTCTCGCGACCAAGGATGCTGGTTCCATCGC 89725 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || | ||| | || ||||| || || || || ||||| || || || ||||| Sbjct 89724 TGGCCTCGAGGTCCTTCGTATCATCAACGAGCCTACCGCAGCTGCCATCGCGTACGGTCT 89665 Query 195841 GGACAAGAA--CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 ||| | |||| || ||| | || || | ||||| || || || || ||||| Sbjct 89664 CGACCGCCAGTCAAGTGCGGAGA--AGAACGTTCTCATCTTCGACCTTGGCGGAGGTACC 89607 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 ||||||||||| || ||||| || |||||| | |||| || ||||| ||||||||| Sbjct 89606 TTTGATGTCTCTCTCCTCAACATCACCGGTGGTGTCTTCGCGGTCAAGGCGACTGCTGGT 89547 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT---CTGAT 196015 || ||||| | |||||||| || ||||| || | |||| | | || | | Sbjct 89546 GACACTCACTTGGGTGGTGAGGACTTCGA-CAACAAC--CTCCTTGAGTTCTTCAAGAAG 89490 Query 196016 GAGTTCCGTCGAAAGAATAAGA------AAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 ||||||| |||| |||| | || || |||| || || | || || || Sbjct 89489 GAGTTCC------AGAAGAAGACCGGCCACGACATCTCTGACGATGCTCGTGCCCTCCGC 89436 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAA 196127 || || | |||| || || |||||||| || || || || | || || || || | Sbjct 89435 CGTCTCCGCTCTGCTTGCGAGCGTGCCAAGCGCACCCTTTC--CAGCGTAGCCCAGACCA 89378 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 || ||| | || || | | | ||| || |||| | | || |||||||| | Sbjct 89377 CCGTCGAGGTAGACTCCCTCTACCAGGGAGAGGATTTCTCGGCGAACATCACCCGTGCTC 89318 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 |||| || ||| | ||| | | | || | | || |||||||| | || | Sbjct 89317 GTTTCGAGGAGATCAACGCCCCTCTCTTCCGCTCCACCCTCGACCCTGTTGAGCGTGTGC 89258 Query 196248 TTCGTGACGCAAAGATG---GATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGAT 196304 | || || |||||| | || ||||| || || || |||||||| || || | Sbjct 89257 TGAAGGATGCCAAGATGCCCCGTGAG---AAGGTCGACGATATCGTCCTTGTCGGTGGTT 89201 Query 196305 CAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAA 196364 | || ||||| || |||||||| | | || | |||| | | | | Sbjct 89200 CGACTCGTATCCCCAAGATTCAGTCTCTCGTCTCCGAGTACTTCGGTGGCCGTCAGCTCA 89141 Query 196365 ACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTC 196424 |||| | |||||||| ||||| || |||||||| ||||| || |||||||| ||||| | Sbjct 89140 ACAAGTCCATCAACCCCGATGAGGCTGTTGCTTACGGTGCCGCTGTTCAGGCCGCTATCC 89081 Query 196425 T 196425 | Sbjct 89080 T 89080 >seq112 Length=444765 Score = 100 bits (110), Expect = 4e-16 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 171851 ATACTAGT--AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGA 171908 ||||| || || ||||| ||||| || || || || ||||| || || ||||| ||||| Sbjct 44388 ATACTCGTCCAGCATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACCATCACTCTCGA 44329 Query 171909 GGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||||||| || ||||| ||||| ||| |||| |||||||| || || ||||| || Sbjct 44328 GGTTGAGTCCTCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 44272 >seq55 Length=161460 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| || || || || ||||| || || || || || ||||||||||||||||| Sbjct 8148 AGGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATTACCCTCGAGGTTGAGTCC 8207 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || ||||| ||||| || ||||||||||||| || || ||||| || Sbjct 8208 TCGGACACTATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAGGG 8254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657856018734720