Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq274 96.9 1e-14 >seq274 Length=162771 Score = 96.9 bits (106), Expect = 1e-14 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 251486 CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAG 251545 |||| || ||||||||||||||||||||||| || ||||| || |||||||| || ||| Sbjct 148363 CACCATGGGAAATCATACAATCACGCTCCATCTCTCCGAACCGCAGACCACCGTCACGAC 148422 Query 251546 CCCTACCCTCGGCAGGCTGACGAGTGAG 251573 | ||||||| | |||||||||||||| Sbjct 148423 TACGACCCTCGACGGGCTGACGAGTGAG 148450 Score = 91.5 bits (100), Expect = 4e-13 Identities = 113/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||| |||| ||||||||| |||||| || ||||| ||||||||||||||||| | | Sbjct 148716 TGGCCGATTGTCATACGAGAGGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATG 148775 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTT 251955 || || || ||||| ||||| ||| |||| | || || | || || || ||||| Sbjct 148776 CCCTCCGCCGTGAACGGCATGTCC---TCCTGGCGGTAGGTGATACCGATGGTACCCTTC 148832 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || |||||||| ||| |||||| || || || Sbjct 148833 TGACCGTGACGCGAAGCGAACTTGTCGCCGAT 148864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471802966453512