Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq24 172 7e-37 seq443 98.7 1e-14 >seq24 Length=169626 Score = 172 bits (190), Expect = 7e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||| | ||||||||| ||||| |||||| |||||||||||||||| ||||||||| Sbjct 83615 GCCATTGCGTACTCGGAGACGCGTTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATG 83674 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||||||||| | | ||||||||| ||| ||||||| || Sbjct 83675 AGGTCCATGAAGTCGAACGGGTTCGTGGCGCGGTAGTGCTTCTCGTTCCCGAGCGCGACG 83734 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| ||||| || || |||||||| ||||||||||||||| ||||||||||||||||| Sbjct 83735 AGCAGACGGTCCGCTACGAACTCGATATACTGGCACATGAGGTCGGCGTTCATGCCGATG 83794 Query 868871 AGCGCCACCGGCAGCGACTC 868890 |||| ||||| |||| ||| Sbjct 83795 AGCGAGACCGGAAGCGCCTC 83814 Score = 152 bits (168), Expect = 6e-31 Identities = 187/253 (74%), Gaps = 3/253 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||||||||| ||| | |||| || | | Sbjct 86240 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGTGCCTCGGCGGCCT 86181 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| || |||||| || | ||||||||| |||||||||||| |||||||| Sbjct 86180 GGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGTTCACGATGCCGTCCGAGGCGGCGA 86121 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGT 869807 | || || || |||||| ||| || || ||||| |||||| ||| ||| ||| | Sbjct 86120 AGAAGGCGAGCACGTGCGAGATGAAATGACGCTCATCGTCGTTGAGGCGGTTGTTCCAAT 86061 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | | ||| | ||||||| ||||||||| ||||||| || ||||| ||||| | Sbjct 86060 CGTGGAGGTCCTTGGAAAGGTCCATCTCCTCGGCAGTCCAGAATGAAGCCTCAGCCTTCT 86001 Query 869868 TGTACATCTCCCA 869880 ||||||||| ||| Sbjct 86000 TGTACATCTGCCA 85988 Score = 147 bits (162), Expect = 3e-29 Identities = 186/255 (73%), Gaps = 3/255 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| | |||||||| ||||||||||||||||||| | | |||| || | | Sbjct 84267 CCGAGTGCACATTCTCGATCATGATCTGGAAGCCGTAAAAGCAGCGCGCCTCGGCGGCCT 84326 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || |||||| || | || |||||| |||||||||||| |||||||| Sbjct 84327 GTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATGCCGTCCGAGGCGGCGA 84386 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGT 869807 | ||||| || |||| ||| ||||||||||||| || ||||| | ||||| Sbjct 84387 AGAAAGCGAGTACGTAGGAGATGAAGTGGCGCTCGTTCGCGTTGAGCTTGTAGTTCCAGT 84446 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | | |||| | ||||| | ||||||| ||||||||| ||| || | ||| || | Sbjct 84447 CCATGAGGTCGTTGGCGAGGTTGATCTCCTCGACGGTCCAGAACGACGCTTGGGCGTTCT 84506 Query 869868 TGTACATCTCCCATA 869882 ||||||||| ||||| Sbjct 84507 TGTACATCTGCCATA 84521 Score = 136 bits (150), Expect = 5e-26 Identities = 190/258 (74%), Gaps = 19/258 (7%) Strand=Plus/Minus Query 869215 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAA 869274 ||| |||||||| |||||||||||||||||||| ||||||| | || || ||||| Sbjct 86485 GAGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCAGAGAA 86426 Query 869275 AAAGATGCCCTCGACGGCGGC-AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT 869333 ||||| ||||| || || || |||||| | ||||||||| || |||| | || || Sbjct 86425 GAAGATACCCTCCACAGCCGCGAAAGCC-ACGAGCCGCTCCGCGAAGGCG--GA----CT 86373 Query 869334 CCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGT 869390 |||||| |||||| | || |||||||| ||||| ||| | | | || | ||| | Sbjct 86372 CCTTGTCAGAGATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCT 86313 Query 869391 CGATGGCG-CGAAAGAGGTGGTC---CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATC 869446 |||||||| ||||| ||||| || || | | || ||||||| || |||||||| Sbjct 86312 CGATGGCGTCGAAA-AGGTGCTCGCGCTGCTTG---GGATCCTTGATGTACGTGTCGATG 86257 Query 869447 AGGAGCGAATAGGTCTCC 869464 || ||||| || |||||| Sbjct 86256 AGCAGCGAGTATGTCTCC 86239 Score = 132 bits (146), Expect = 6e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 || ||| ||| ||| |||||| ||||| |||||||||| ||||||||||| ||||| Sbjct 86877 TAGTCGGACACCCGCTTCTCGAAGAAGTTTGTCTTGCCCTGGAGCGAGATCATGTCCATG 86818 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819 | ||||||||||| | ||||||| ||| || ||||| | |||| || || Sbjct 86817 AAATCGAACGGGTTGGTCACGTTGTAGTACTTCTCATCGCCGAGAGCGACGAGAAGACGA 86758 Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGC 868875 || ||||| ||||||||||||||||||||||| | ||||||||||||||| || Sbjct 86757 TCAGCGACGAACTCGATGTACTGGCACATGAGCTTCGAGTTCATGCCGATGAGGGC 86702 Score = 109 bits (120), Expect = 7e-18 Identities = 197/286 (69%), Gaps = 3/286 (1%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | ||||| || | | || ||||| | || ||||| Sbjct 83986 ACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTCAACCCCGGCATCAACCCCCGCTT 84045 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| || |||||| ||| || ||||| || | ||||||||| || ||||| Sbjct 84046 CTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAGAACACGCCCTCGACTGCCGCAAA 84105 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 ||| |||| ||| ||||| || | ||| | | ||||| || |||||| Sbjct 84106 TGCGACCAGCCTCTCCGCAAACACT--GAA-CGCTCGTCCTCAATCCAGCGCAACGCCCA 84162 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 ||| ||||| || | | |||| | |||||||||||| || ||| | ||| Sbjct 84163 GTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCGTCGAACAGGAACGCGCGTTC 84222 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || |||||||||| ||| |||||||| || ||||| || |||||| Sbjct 84223 AGCGGGGTCCTTGATATACGTGTCGATGAGCAGCGAGTACGTCTCC 84268 >seq443 Length=126294 Score = 98.7 bits (108), Expect = 1e-14 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 || || |||||||| | ||| ||| | ||| || | ||||| || |||||||||| Sbjct 85176 CCAATACCGCCGGCGGTTTTGCTGATCATCGCACAATCCTTGAGAGTCGAGTAGATGCCC 85117 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 ||||| |||||| |||||||| ||| |||||||| || || |||| | ||| Sbjct 85116 TCGATGGAGTCGTCCTTCATGCACACAAGAAAGCATGAACTCAGCTGGGGGTTGGGAGTG 85057 Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAG 1630362 ||||||||||| || ||||||| || |||||| || || |||||| || |||| Sbjct 85056 CCGGCGTTGAAAAGGGTGGGCGATGCATGGGTGAAGTACCGCTCCGACATCAGGTGGTAG 84997 Query 1630363 GT 1630364 || Sbjct 84996 GT 84995 Score = 98.7 bits (108), Expect = 1e-14 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 1627864 AACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGG 1627923 ||| ||||||| || ||||||||||||| || || || |||||||||| ||| || | Sbjct 86119 AACGCGTCGGCCAGACCCTGCACGCCGATTCCGATGGGGCGGTGGCGCATGTTGGAACGA 86060 Query 1627924 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACG 1627983 || ||||| || | || |||||||||| |||||| | |||||| |||||| | | || Sbjct 86059 CGCGCCTCCGGAATAGGATAGTGGTTGACGTCGATGATGCGGTTCAGGTTGAACGCGACC 86000 Query 1627984 ACCT 1627987 |||| Sbjct 85999 ACCT 85996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107075517805992