Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq443 138 1e-27 seq460 86.0 6e-12 >seq443 Length=126294 Score = 138 bits (152), Expect = 1e-27 Identities = 309/460 (67%), Gaps = 7/460 (2%) Strand=Plus/Minus Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612 ||| | ||||| || |||||||||| || || |||||| ||| | ||||| ||||| Sbjct 86447 GTGTAGGGCTCGAAGCATTCGTTGTTGCCGAGGATCTGACTCGTCGAGGCGGTAGGCATC 86388 Query 138613 TACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGAC 138672 || || | || || ||||| | ||||| | || | |||| | || | Sbjct 86387 GGAGCGACAAGCAGGGAGTTCCGAAGACCGTACTGTGCGACCTTTGCCTTCAAGCTCGCC 86328 Query 138673 CAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTT 138732 |||||||| | |||| |||| | | ||| | || || || | | | ||| Sbjct 86327 CAGTCCCATAGATCGGTAGGAGTGATCCCCCATAGGTCATATTGGAGCTTGCCCTCGGAC 86268 Query 138733 GCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCC 138792 || || ||||| | ||||| ||||| |||||||| | ||||| ||| |||| | Sbjct 86267 GCTGGGCTGCCCTGGTACGTCTCGTAAGGGCCAAACTCCTTCGCCATCTCACAGCTCCCT 86208 Query 138793 TCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAAT-CGGGCCTCGGC 138851 || | || ||| ||| || |||||| |||||| | | |||| | || ||||||| Sbjct 86207 TCAACAGCGGCATGGTAGATGGTTTCGAAGATCTGCAGTTCGAGCCCTGCGTGCCTCGGG 86148 Query 138852 GCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCC 138911 || |||||||||| || | |||||||||||||||| || |||||||| | ||| Sbjct 86147 CGAGTCAAACGGCATGCGCAGGGCCATGAACGCGTCGGCCAGACCCTGCACGCCGATTCC 86088 Query 138912 GACAGGGCGATGGCGCAGATTTG-ACGCTTTTGCGGCTTCG--ATAGGATAATAGTTTAC 138968 || ||||| ||||||| || | ||| ||| || || |||||||| | ||| || Sbjct 86087 GATGGGGCGGTGGCGCATGTTGGAACG---ACGCGCCTCCGGAATAGGATAGTGGTTGAC 86031 Query 138969 ATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTC 139008 |||||||| ||| | || | |||||||||| ||| Sbjct 86030 GTCGATGATGCGGTTCAGGTTGAACGCGACCACCTTGGTC 85991 >seq460 Length=141031 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| || || || ||||| || || || ||| | |||||||| || || Sbjct 61933 AAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTTGCTGGCAAG 61874 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGA 24894 || ||||||||| | | | | || |||||||||||||| ||||| Sbjct 61873 CAACTGGAGGATGGTCGTACCCTCTCCGATTATAACATTCAGAAGGA 61827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893235993280