Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq460 122 6e-23
seq121 82.4 5e-11
>seq460
Length=141031
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||||||||||||| |||||||| || |||| ||||
Sbjct 61115 AGGACGAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTGCGGCCATCC 61174
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || || |||||||| |||| | |||||||||||
Sbjct 61175 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCC 61234
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || | |||||| || | || ||
Sbjct 61235 TGGATCTTCGCCTTCAC--AT--TGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGAT 61290
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || || ||||| || ||||| |||||
Sbjct 61291 GGTCTTGCCGGTCAGAGTCTTAACGAAGATTTGCAT 61326
Score = 100 bits (110), Expect = 2e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831
||||| | ||||||||||||||||||||||| || || ||| | || |||| ||||||
Sbjct 61812 AGGTGGAGAGTGCTCTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGT 61871
Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || ||||| || || |||||||| | || | |||||||||||
Sbjct 61872 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTC 61924
Score = 82.4 bits (90), Expect = 5e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| ||| ||||||||||||||| ||||| || || |||| | ||
Sbjct 62042 AGGACGAGATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCGTCC 62101
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
|| || ||||| ||||||||||| || || ||||||||
Sbjct 62102 TCAAGCTGCTTCCCGGCGAAGATAAGACGCTGCTGGTC 62139
>seq121
Length=508097
Score = 82.4 bits (90), Expect = 5e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| ||||| ||||| ||| |||| ||||
Sbjct 178736 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCC 178677
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
|| || ||||| |||||||||||||| || ||||||||
Sbjct 178676 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTC 178639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325689719760344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |