Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq443 147 2e-30 seq460 131 2e-25 seq24 127 2e-24 seq55 82.4 7e-11 >seq443 Length=126294 Score = 147 bits (162), Expect = 2e-30 Identities = 398/598 (67%), Gaps = 17/598 (3%) Strand=Plus/Minus Query 148329 TCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAG 148388 ||||||||||| | ||||| |||| || || ||||| || || ||||| ||| Sbjct 86429 TCGTTGTTGCCGAGGATCTGACTCGTCGAGGCGGTAGGCATCGGAGCGACAAGCAGGGAG 86370 Query 148389 TTGCGCAAACCGCGATTTTTTAT-TTTGCGCTTCAGAGC-CGCCCAGTCCCAGAGCGGCG 148446 || || | |||| | | | ||||| ||||| ||| |||||||||||| || | Sbjct 86369 TTCCGAAGACCGTACTGTGCGACCTTTGC-CTTCA-AGCTCGCCCAGTCCCATAGATCGG 86312 Query 148447 ACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGT 148506 || || | ||| | ||| || || || |||| | || |||||||||| || Sbjct 86311 TAGGAGTGATCCCCCATAGGTCATATTGGAGCTTGCCCTCGGACGCTGGGCTGCCCTGGT 86252 Query 148507 ACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGT 148566 ||| ||| || || | || ||||| || |||||| | || | ||| | | || Sbjct 86251 ACGTCTCGTAAGGGCCAAACTCCTTCGCCATCTCACAGCTCCCTTCAACAGCGGCATGGT 86192 Query 148567 AAATCGTCTCGGCAATTTGCCTGTTGAGCA----GCGCCGCCGACTCGCTTTCGTACGGC 148622 | || || ||| || ||| | |||| | ||| | | | | || ||||| Sbjct 86191 AGATGGTTTCGAAGATCTGCAGTTCGAGCCCTGCGTGCCTCGGGCGAG---TCAAACGGC 86135 Query 148623 ATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGT 148682 || ||||| || ||||||||||| || ||||| ||||| | || ||||| ||||| Sbjct 86134 ATGCGCAGGGCCATGAACGCGTCGGCCAGACCCTGCACGCCGATTCCGATGGGGCGGTGG 86075 Query 148683 TTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTC 148741 |||||||| | ||||| ||| || |||||||||||| ||||||||| || Sbjct 86074 CGCATGTTGGAACGACGCGC-CTCCGGAATAGGATAGTGGTTGACGTCGATGATGCGGTT 86016 Query 148742 AAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATC 148801 || ||| | | |||||||| || | | ||| | | |||| ||||||| ||| Sbjct 86015 CAGGTTGAACGCGACCACCTTGGTCACGTCGTGCAACTTCTGGAAATTGTACTTGCCATT 85956 Query 148802 TACGATGCA--TCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGG 148859 ||||| | ||| | |||||||| || |||||||| || ||||||||||| || Sbjct 85955 CTCGATGAAGGACGG--GAGCGCGATAGACGCGAGATTGCAGACAGCCGTCTCATCGGGA 85898 Query 148860 GCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCT 148917 | |||||| || ||||||| ||| |||||| | |||||| ||| | ||||| Sbjct 85897 GACGAGTACTCGACAATCTCGGTGCAGAGATTGGACGACTTGATCGTGCCGAGGTTCT 85840 >seq460 Length=141031 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| || | |||| | | | |||||||||||||||| Sbjct 61129 GGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTGCGGCCA-TCCTCGAGCTGCTTGC 61187 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| |||||||||||||| ||||| || |||||||| |||||| || Sbjct 61188 CGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCT 61247 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | ||| || |||| |||| ||| ||||||||||||| Sbjct 61248 TCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAGAG 61307 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 61308 TCTTAACGAAGATTTGCAT 61326 >seq24 Length=169626 Score = 127 bits (140), Expect = 2e-24 Identities = 351/532 (66%), Gaps = 32/532 (6%) Strand=Plus/Minus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 || |||||| ||||| ||||||| ||||||||| ||||| || ||||| ||| ||||| Sbjct 86545 CAAGCACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATAAGCTCATTGGAGAACGT 86486 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || |||||||| | ||| | |||||| |||| |||| ||||||| || || || Sbjct 86485 GAGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCAGAGAA 86426 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818 ||| | |||||||| || || || || | ||||| || || | | | |||| Sbjct 86425 GAAGATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCGAAGGCGGACTCCTTGTC 86366 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGC 120878 |||||| | || ||||| || ||||| || | ||| || ||| ||||| || Sbjct 86365 AGAGATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCTCGATGGC 86306 Query 120879 GTTCAGCAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATG--------GATGAGC 120930 || | || | |||||| || || | | | ||||| ||||||| Sbjct 86305 GTCGAAAAG------GTGCTCGCGCTGCTTGGGATCCT--TGATGTACGTGTCGATGAGC 86254 Query 120931 AGATTGTACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGC 120990 || ||| | |||| ||| | | ||| |||| | || | ||| ||| | | Sbjct 86253 AGCGAGTATGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGT 86194 Query 120991 GCCTCCAGCTCGGGCACCGCCCGC--TGCATGTAC---TCGATAAGGTTAATATTCACGA 121045 ||||| || ||| | || | || | | || |||| |||||| ||||||| Sbjct 86193 GCCTCG-GC---GGCCTGGACCTCATTGGA-GAACCGCTCGACAAGGTTCTCGTTCACGA 86139 Query 121046 TACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCG 121105 | | ||| | |||||||||||| || ||||||||| ||| || || ||||| ||||| Sbjct 86138 TGCCGTCCGAGGCGGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACGCTCATCGTCGT 86079 Query 121106 TGA---GCTTGTGCGCAAAATCGTCATAGTCCTTGGACAGGTCGACCTCCTC 121154 ||| | |||| | |||||| ||||||||| ||||| | |||||| Sbjct 86078 TGAGGCGGTTGTTC---CAATCGTGGAGGTCCTTGGAAAGGTCCATCTCCTC 86030 Score = 109 bits (120), Expect = 5e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||| |||||||||||| || ||||| || ||||||| | ||| ||| || ||| Sbjct 83623 GTACTCGGAGACGCGTTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATGAGGTCCAT 83682 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 || ||||||||||| | ||| ||| ||| | || | | |||||||| || Sbjct 83683 GAAGTCGAACGGGTTCGTGGCGCGGTAGTGCTTCTCGTTCCCGAGCGCGACGAGCAGACG 83742 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533 ||||||||| ||||| || |||| ||||||| | ||||||||||| | | || || Sbjct 83743 GTCCGCTACGAACTCGATATACTGGCACATGAGGTCGGCGTTCATGCCGATGAGCGAGAC 83802 Query 120534 CGGCAACGCC 120543 ||| | |||| Sbjct 83803 CGGAAGCGCC 83812 Score = 102 bits (112), Expect = 8e-17 Identities = 311/478 (65%), Gaps = 6/478 (1%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || ||||||||||| ||||||| |||||||| || || |||||||| |||||| Sbjct 83963 AGACACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTC 84022 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 | || ||||| | || | |||| | |||| |||||||| || || || ||| Sbjct 84023 AACCCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAG 84082 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 ||||||||||| || ||||| ||||||| | ||| || ||| | || | Sbjct 84083 AACACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTCCGCAAACACTGAACGCTCGTCC 84142 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCG 120879 || ||||| || ||||| || ||||| || || | ||||| || |||| ||| Sbjct 84143 TCAATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCG 84202 Query 120880 TTCAGCAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTAC 120939 | | ||| | |||| || | ||| || | | ||||||||| |||| Sbjct 84203 TCGAACAGGAACGCGCGTTCAGCGGGGTCCTTGATATACGTGTCGATGAGCAGCGAGTAC 84262 Query 120940 ATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGC 120999 | |||| |||||| |||||||| | || | ||||||| | ||||||| Sbjct 84263 GTCTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCGTAAAAGCAGCGCGCCTCGGCG 84322 Query 121000 TCGGGCACCGCCCGCTGCATGTA---CTCGATAAGGTTAATATTCACGATACTGTCGGCG 121056 | | || | || | | | | ||||| || || |||||||| | ||| | | Sbjct 84323 GCCTGTAC--CTCGTTAGA-GAACCGCTCGACGAGATTCTCGTTCACGATGCCGTCCGAG 84379 Query 121057 GCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGT 121114 ||||||||||| || || |||| ||| ||||| ||||||| | ||||||||| Sbjct 84380 GCGGCGAAGAAAGCGAGTACGTAGGAGATGAAGTGGCGCTCGTTCGCGTTGAGCTTGT 84437 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 120364 ACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAAC 120423 || || ||||| || |||||||| ||||||| | ||| || ||| ||| || |||||| Sbjct 86868 ACCCGCTTCTCGAAGAAGTTTGTCTTGCCCTGGAGCGAGATCATGTCCATGAAATCGAAC 86809 Query 120424 GGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACA 120483 |||||| || |||| |||| ||| | ||| | ||||| || || || || || Sbjct 86808 GGGTTGGTCACGTTGTAGTACTTCTCATCGCCGAGAGCGACGAGAAGACGATCAGCGACG 86749 Query 120484 AACTCAATGTACTCGCACATGGACTGCGCGTTCATGCC 120521 ||||| ||||||| ||||||| || || ||||||||| Sbjct 86748 AACTCGATGTACTGGCACATGAGCTTCGAGTTCATGCC 86711 >seq55 Length=161460 Score = 82.4 bits (90), Expect = 7e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| |||| | ||| | | | |||||||||||||||| Sbjct 8404 GGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 8346 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGAT 133555 ||||| | || || |||||||||||||| || || Sbjct 8345 CCGCGAAGATCAGGCGCTGCTGGTCGGGGGGAAT 8312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416110818240