Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq24 84.2 2e-11 >seq24 Length=169626 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/178 (71%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | |||||||||| |||| | ||| ||||| |||||||| ||||| Sbjct 86162 GCTCGACAAGGTTCTCGTTCACGATGCCGTCCGAGGCGGCGAAGAAGGCGAGCACGTGCG 86103 Query 110772 TAA-GAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGAC 110830 | |||| | || || | |||||| || |||||||| || | | ||||||||| Sbjct 86102 AGATGAAATGA-CGCTCATCGTCGTTGAGGCGGTTGTTCCAATCGTGGAGGTCCTTGGAA 86044 Query 110831 ATGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888 | ||| ||||| ||| | ||||| || | | |||||||||||| ||||||| Sbjct 86043 AGGTCCATCTCCTCGGCAGTCCAGAATGAAGCCTCAGCCTTCTTGTACATCTGCCAAA 85986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445090082584320